Microsatellites /Tandem Repeats database

Genome: Coxiella burnetii RSA 493

Search your sequence for microsatellites

This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Info

Percentaje of mismatches allowed within the tandem repeats: 0 | 0.1 | 0.2
 
PositionSequence 
197668GAGGGCAGAAGACAGAGGACAGAGGACAGAGGACAGAGGACAGAAGACAGAAGACAGAGGACAGDesign primers
259556GACAGAG-GACAGAA-GACAGAA-GACAGAA-GACAGAA-GACAGAA-GACAGADesign primers
259605GACGGAA-GACGGAA-GACGGAA-GACGGAA-GACGGAA-GACDesign primers
259644GAAGACG-GAAGACG-GAAGACG-GAAGACG-GAAGACG-GAAGACG-GAAGACG-GAAGACG-GAAGACG-GAAGACG-GAAGACG-GAAGACG-GAAGACG-GAAGACDesign primers
831258AAGAAAATA-AAGAAAATA-AAGAAAATA-AAGAAAATDesign primers
838446TGAAGA-TGAAGA-TGAAGA-TGAAGA-TGAADesign primers
1418085CAGAGGA-CAGAGGA-CAGAGGA-CAGAGGA-CDesign primers
1435043CTGTCTT-CTGTCTT-CTGTCTT-CTGDesign primers
1435077TCTGCCC-TCTGCCC-TCTGCCC-TCTGCCDesign primers
1471838TGAAAA-GGAAAA-GGAAAA-GGAAAA-GGAAAA-GGAAAADesign primers

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