Microsatellites /Tandem Repeats database

Genome: Bacillus licheniformis ATCC 14580

Search your sequence for microsatellites
This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Info
Percentaje of mismatches allowed within the tandem repeats: 0 | 0.1 | 0.2
 
PositionSequence 
51451AAAGATAAGGATAAAGAAAAAGAGDesign primers
187940TATATACAATATACACAATATGTACAATATACACAADesign primers
282337TAGAGTTGAGTCGAGCAGAGAAGAGTACAGDesign primers
413693TG-TC-TT-TT-TC-TC-TT-TT-TC-TC-TT-TTDesign primers
624691TT-TT-TT-CT-TT-TT-TG-TT-TT-GT-TT-GT-TDesign primers
628515GACATGGGCGGCATGGGCGGCATGGGCDesign primers
671261ACCAAGAACAAGATCAAGATCAAGDesign primers
677921TGTTTTATCTGTTTTATTCGTTTTATCTGTTTTATTDesign primers
811945CCCAACGGGAGCGACCGGGCCAACAGGAGCCACCGGCCCGACAGGAGCGACGGGDesign primers
812145CCACCGGAGCGACGGGTCCGACAGGAGTGACGGGTCCAACGGGAGCGATGGGTCDesign primers
812207GCCACCGGAGCCACAGGTGCAACAGGAGCGACAGGTGCAACAGGAGCGACAGGTDesign primers
812536GGGTCCAACGGGAGCCACCGGCCCAACGGGAGCGACGGGTCCAACAGGAGTAACAGGTTCAACGGGAGCAACDesign primers
812909CCGACAGGAGCGACGGGTCCAACTGGAGCGACAGGTGCAACAGGAGCGACAGGTCCGACCGGAGTGACGGGAGCAACCGGAGCGACGGGTCCGACAGGAGTGACGGGTDesign primers
813018CAACGGGAGCCACCGGAG-CAACGGGAGCCACCGGAG-CAACGGGAGCCACCGGAGDesign primers
813272ACAGGAGCGACGGGTCCAACAGGAGTAACAGGTCCAACTGGAGCGACAGGTGCAACAGGAGCGACAGGTCCGACAGGAGTGACGGGAGCAACAGGAGCGACGGGTCCGDesign primers
813499GGGTCCAACGGGAGCCACCGGCCCAACGGGAGCGACGGGTCCAACAGGAGTAACAGGTCCAACGGGAGAAACDesign primers
813666CAACGGGAGCAACAGGAGCAACAGGAGDesign primers
813695ACAGGAGCCACAGGTCCAACGGGAGCCACCGGCCCAACGGGAGCGACGGGTCCADesign primers
813806GGAGCCACAGGTCCGACAGGAGCGACGGGTCCAACAGGAGTAACAGGTCCAACAGGAGCGACAGGTGCAACAGGAGCGACAGGTCCGACCDesign primers
814422CAACGGGAGCCACCGGAGCAACGGGAGCCACTGGCCCGACGGGAGCAACAGGAGDesign primers
814480GGGTCCAACGGGAGCCACCGGCCCAACGGGAGCGACGGGTCCAACAGGAGTAACDesign primers
815923GGCCCGACCGGAGCGACGGGTCCAACGGGAGCGACGGGTCCGACCGGAGCGACAGGCCCGACAGGAGCAACGDesign primers
816115GCAACAGGAGCGACCGGCCCGACAGGAGCGACAGGCCCGACAGGAGCGACAGGCDesign primers
816170CGACAGGAGCAACAGGAGCGACCGGAGDesign primers
816283GGAGCAACAGGAGCGACCGGCCCGACAGGAGCGACCGGAGCAACAGGAGCGACCGGAGCAACAGGAGCGACAGGAGCGACAGGAGCAACADesign primers
816571GGAGCGACAGGAGCGACCGGAGCAACADesign primers
816599GTCCAACAGGAGCGACCGGAGCAACAGGAGCGACAGGTCCGACGGGAGCGACCGDesign primers
816709GCGACAGGAGCGACCGGAGCAACGGGAGCGACCGGCCCGACAGGAGCAACGGGADesign primers
816782CGACGGGAGCGACAGGAGCGACCGGAGCAACGGGAGDesign primers
816823GGCCCGACAGGAGCAACAGGTCCAACAGGAGCGACAGGAGCGACAGGAGCAACGDesign primers
816940GGAGCAACAGGAGCGACAGGAGCAACGGGAGCGACADesign primers
816980CGACGGGAGCAACGGGAGCGACAGGAGCAACGGGAGDesign primers
817027ACAGGAGCAACGGGAGCAACGGGAGCADesign primers
817061CAACAGGAGCGACAGGAGCGACAGGAGCAACGGGAGDesign primers
817111GGAGCCACCGGAGCAACAGGAGCGACAGGAGCAACGGGAGCAACGGGAGCGACADesign primers
817210GGAGCAACAGGAGCGACAGGAGCAACGGGAGCGACADesign primers
817250CGACGGGAGCAACGGGAGCGACAGGAGDesign primers
817309GGAGCAACAGGAGCGACAGGAGCAACGGGAGCGACADesign primers
817546CCGACAGGAGCAACAGGAGTGACAGGAGCAACGGGAGCGACAGGTCCAACAGGAGCGACAGGAGCGACAGGAGCTACGGGAGCAACAGGADesign primers
817736CAACAGGAGCGACAGGAGCAACCGGAGCAACAGGAGDesign primers
1047365ATGTCCCGCACAGCTCCAACAGCTGTGTCCCATGCAGCTCCAACAGCTGTGTCCCGCGCAGCTCCAACAGCTDesign primers
1100003TAA-TAG-TAG-TAA-TAA-TAG-TAG-TAG-TAGDesign primers
1282026GCGGAGGCTACGGCGGTGGCTACAGCGGCGGCTATGGCGGCGGCTATGDesign primers
1477830TGTTTATGTGTATGCTTATGTTTADesign primers
1809675AAAGAAAAAGCAAAAGACAAAGACDesign primers
2008087ATTTGTTGAAAATATGTTTAAAATTTTTCGAAADesign primers
2348397TCTCAACTCAGCTCATCTCAACTCADesign primers
2494258CATCGCCAGCGCCCTCGCAATCGCDesign primers
2512959TTTTCTCTGTTTTTTTCTGATTTTCTCGATDesign primers
2615594CCCAGCCAAGCCCGGCGCAGCCGAGDesign primers
2749444AACAAATTTTATGAAATTTTCACAATTTTTDesign primers
3283144GTTTTTTCATATTTTTGCATATTTTTTCTTDesign primers
4187950TATATTTTTTTATTTTTTTCTATTATTTTTDesign primers

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