This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Percentaje of mismatches allowed within the tandem repeats:
0 |
0.1 |
0.2
| Position | Sequence | |
| 71344 | CAATAAAAATGGCAATAAAAAAGGCAATAAAAATAG | Design primers |
| 1389194 | TTCTCAGTT-TTCTCAGTT-TTCTCAGTT-TTCTCAG | Design primers |
| 1400720 | GAACCAGAGGTTCAGACT-AAACCAGAGGTTCAGACT-AAACCAGAGGTTCAGACT | Design primers |
| 1400775 | AACCAGAAGTTCAGACTA-AACCAGAAGTTCAGACTA-AACCAGAAGTTCAGACTA-AACCAGAGGTTCAGACTA-AACCAGAGGTTCAGACTA-AACCAGAGGTTCAGACTA-AACCAGAAGTTCAGACTA-AACCAGAAGTTCAGACTA-AACCAGAAGTTCAGACTA-AACCAGAAGTTCAGGCTA-AACCAGAAGTTCAGGCTA-AACCAGAAGTTCAG | Design primers |
| 1497080 | TATTTTAT-TATTTTAT-TATTTTAT | Design primers |
| 1608796 | CAAACTTGAAGAAGAGCAACGAAT-CAAGCTTGAAGAAGAGCAACGAAT-CAAGCTTGAGGAAGAGCAACGAAT-CAAGCTTGAGGAAGAGCAACGAAT-CAAGCTTGAGGAAGAGCAACGAAT-CAAACTTGAGGAAGAGCAACGAAT-CAAGCTTGAGGAAGAGCAACGAAT-CAAGCTTGAGGAAGAGCAACGAAT-CAAACTTGA | Design primers |
| 3190106 | TTACTTGA-TTACTTGA-TTACTTGA-TTACTT | Design primers |
| 3190137 | TTACTTA-TTACTTA-TTACTTA-TTACTTA-TTACTTA-TTACTTA-TTACTTA-TTACTTA-TTACTTA-T | Design primers |
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