Microsatellites database

Microsatellites /Tandem Repeats database

Genome: Burkholderia thailandensis E264

This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.

Info

Percentaje of mismatches allowed within the tandem repeats: 0 | 0.1 | **0.2**
Position	Sequence
40845	CGCGCCGTGCCGTGCCGCCCCTCGC	Design primers
46401	TCGCCGCTTCGTCGCTTCGCCGCT	Design primers
66834	GCCGACGCCAACGCCGACGCCAACGCCGAA	Design primers
72531	CGGCGGGCGCGGCGTGCGCGGCAGGCG	Design primers
74845	GCGCG-ACGCG-GCGCG-GCGCG-GGGCG	Design primers
84474	CGGCGGCGGCGACGGGGGCGGCAG	Design primers
85985	GGTCGATCGGTCAATCGGTCGATC	Design primers
96918	CGGGCGCGGACGCCGGCGCGGCCG	Design primers
153330	CCGTCTTGCGTGCCGGCGTCTTGCGCGCGGCCGTCTTGCGGGCGG	Design primers
161437	GCCGAAGC-ACCGAAGC-ACCGAAGC-ACCGAAGC	Design primers
195099	CGGCAGG-CGGCAGG-CGGCCGG-CGGCCGG	Design primers
195158	GCGCCGCAGATTCGCACCGAAGATTCGCACCGAAGATTC	Design primers
219050	CGCGCAAGCGCACGCGAACACGCA	Design primers
223363	GCGTCGGCATCGACGTCGGCGACG	Design primers
238995	AGGCGGCGGATTGGCGAACCGGCGGATTGGCAAGCCGGCTGATCGGCG	Design primers
239157	GGCGATCA-CCGGATCA-CCGGATCA-CCGGATCA-CCGGATCA-CCGGATCA	Design primers
254654	CGCGCTCGCGTTCGCGCTCGCGTTCGGGCT	Design primers
265371	GCCGCGGCGGGGCGGGGCGGGCCTCGCCGG	Design primers
273021	GGCCGGAACCCGGGCCGGGACCCATGCCGGAGCCCG	Design primers
310388	CGTGCGA-AATGCGA-AATGCGA-AATGCGA-AATGCGA-AATGCGA	Design primers
310752	GTCGAACCGATGTTGAACCGATGTCGGAACGAT	Design primers
311412	GCCTG-CCGTG-CCGTG-CCGTG-CCGTG-CCGTG	Design primers
311443	CGGGC-CGGGC-CGGGC-CGGGC-CGGGC-CGGGC-CGGGC-CGGGC	Design primers
314325	GCCTTTCGGCGAGCCTCTTGGCGAGCCTTTCTGCGA	Design primers
315232	GCGCAT-CCGCAT-CCGCAT-CCGCAT-CCGCAT	Design primers
321249	CGATGAAT-CGATGAAT-CGGTGAAT	Design primers
329697	GCCTC-ACGTC-ACGTC-ACGTC-ACGTC-ACGTC	Design primers
342140	GCGATGCGCTGCGCTGAGATGCGCTGCGTT	Design primers
343672	CGCCGCGACGCGTCGCGGCGCGCGG	Design primers
347993	GCCGCTTGATGCCATTTGATGCCGCTCGATGTCGCGTGAT	Design primers
348306	CGATCGAAC-CGATCGAAC-CGATTGAAC	Design primers
351019	CGCGGCGTGTTGTGGCGTGTTGCGGCGCGT	Design primers
355255	GCCAAGCCGTCAAGCCGCCGAGCC	Design primers
364228	GCGCGTTT-CCGCTTCG-CCGCTTCG-CCGCTTCG-CCGCTTCG-CCGCTTCG-CCGCTTCG-CCGCTTCG-CCGCTTCG-CCGCTTCG-CCGCTTCG-CCGCTTCG-CCGCTTCG-CCGCTTCG-CCGCTTCG	Design primers
367755	CGCATTCAGCGCACTCAGCGCACTCAG	Design primers
367789	GAGCGCCC-AAGCGCCC-AAGCGCCC	Design primers
374071	CCGCCTCCGCCAGCGCCTTCGCCT	Design primers
380143	GC-GC-GC-GC-GC-GT-TC-GC-GC-TC-GC-GC	Design primers
389925	GGCGC-GCCGC-GCCGC-GCCGC-GACGC	Design primers
390280	GCGCGTG-TCGCGTG-TCGCGTG-TCGCGTG	Design primers
394209	GCCGCGGCGCGCTGCGCTGCGCCGCGGCGC	Design primers
402529	AG-CG-CG-AG-CA-CG-AG-CG-CG-AG-CG-CG	Design primers
406545	TCGAATGCTTCGAGTGCTTCGAGTGCT	Design primers
409931	CGGGGCGAC-CGGCGCGAC-CGGCGCGAC-CGGCGCGAC	Design primers
412383	CGCCACCGCTAACCGCCATCGCTAACTGCCACCGCCAAC	Design primers
412423	GCTACAGCCAACC-GCTACAGCCAACC-GCTACAGCCAACC	Design primers
419410	CCGCCGCGCACGCCGCGCCTGCCGCGC	Design primers
419842	CGCGGCGGCGGCCGCGCCCGCCGC	Design primers
420648	AATCGGCCACGAATCCGCGACGAATCGGCTACG	Design primers
432347	AGGACGACGG-CAGACGACGG-CAGACGACGG	Design primers
440312	CGGCAGAC-CGCAAGAC-AGTAAGAC-CGCAAGAC-CGCAAGAC-CGCAAGAC-CGCAAGAC-CGCAAGAC	Design primers
442530	ATTCCGGAAATCCGGATTTCCGGA	Design primers
453891	CGGCCGCCGCTTCCGCGGCCGCTTCGGCCGCCGCGC	Design primers
453951	CCGCGCCGA-CCGCGCCGA-CCGCGCCGT	Design primers
480367	CGCCGCCGCGCGCGGCCGCGCGCCGTTGCG	Design primers
491566	GCGCGGCCCGGCGAGGCGCCGCCCG	Design primers
510410	CGCGCCCGCGCGCGCGGCCGGGCC	Design primers
512120	CGTCCGCCGGCCGCGGTCCGCCGTCCGC	Design primers
533689	CGTGTCGCTCGTGCCGCTCGCGTCGCT	Design primers
555183	GCG-GCG-GTG-GCG-GTG-GCG-GTG-GCG	Design primers
612878	GCGGC-GCGGC-GCGCC-GCCGC-GCGGC	Design primers
636357	GCGAGCGGCGAGAAGGCAAGCGCTGAGAAGGCGAGCGGCGAGAAG	Design primers
652737	CACGAAACGAAACGGCACGAAACGGCACGAAACGGCACGAAACGG	Design primers
658843	GCATGTTGCCGACGCGCATGTCGCAGATGCGCACGTCGCCAACGCGCACGTCGCCGTCGC	Design primers
669644	CACGCGCTCGCGAACGCGAACGCG	Design primers
695271	GTCGCGTTCGCGGTCGCGGTCGGG	Design primers
697944	CGCGGCGCCGCCGCGCCGCCGCGC	Design primers
706724	GGGCGT-CGGCGT-CGGCGT-CGGCGT	Design primers
725296	GCGCGAC-AGGCGAC-AGGCGAC-AGGCGAC-AGGCGAC-AGGCGAC	Design primers
728057	ATGTCG-GCATCG-GCATCG-GCATCG-GCATCG-GCATCG-GCATCG-GCATCG-GCATCG-GCGTCG-GCATCG-GCATCG	Design primers
728154	CGGCGCG-CGGCGCG-CGGCGCG-CGGCGCG	Design primers
732962	TCGTTG-CTGTTG-CTGTTG-CTGTTG-CTGTTG-CTGTTG	Design primers
743057	CGGCCGA-TTGCCGA-TTGCCGA-TTGCCGA-TTGCCGA-TTGCCGA	Design primers
754012	CGAAGCGGACGAGGCGGACGAAGCGCA	Design primers
768585	CTGGCCGC-CGAAACGC-CGAAACGC-CGAAACGC-CGAAACGC-CGAAACGC-CGAAACGC-CGAAACGC-CGAAACGC-CGAAACGC-CGAAACGC-CGAAACGC	Design primers
781927	ACGCGAACGCGCTCGCGACCGCGA	Design primers
785739	GCGCCG-GCGTCG-GCGTCG-GCGTCG-GCGGCG	Design primers
788449	CGCTGCGCGCCGCGCGCTGGGCGCTGCA	Design primers
794098	CATGCCCGTGGCCGTGCGCGTGGCCGTGCGCGTGGCCGTGCGCGTGGCCATGCCCGTGAC	Design primers
799182	GGCGCGCGAGGCGCTCGAGGCGCGCAA	Design primers
824656	CGCCGGCGCGGGCGCCGGCGTCGG	Design primers
855396	CACGAGCGGCACCACCAGCAGCACCACGAGCACCAC	Design primers
856745	GCGGCGGCGGTGGCGGCAGCGGCG	Design primers
871613	GCGAGC-GCGAGC-GCGACC-GCGACC	Design primers
940770	CCGCCGTGGCGCCATCGTGGCGCCGCCGTCGCG	Design primers
943963	CGGCGTGCTCGGCGTCGTGCTGGGCGGCCGGCTCGG	Design primers
944762	GCTGCGA-AGCACGA-AGCACGA-AGCACGA-AGCACGA-AGCACGA-AGCACGA-AGCACGA-AGCACGA-AGCACGA-AGCACGA-AGCACGA	Design primers
952417	TCGCCGCGCTCGCCGCGGGCGCCGCGC	Design primers
953624	GCGCGCGGGCGCGCTCGCGCTCGC	Design primers
958093	TGATTG-CCAACG-CCAACG-CCAACG-CCAACG-CCAACG-CCAACG-CCAACG-CCAACG-CCAACG-CCAACG-CCAACG	Design primers
959778	GACGCACCGAGGCACCGAGGCACC	Design primers
972562	GCGCGGAGGGCGGAGAGCGGAGAGCGGA	Design primers
986491	CGTCGAGCGCATCGAGCGCGACGAGCG	Design primers
989691	CGGGC-TCGGC-TCGGC-TCGGC-CCGGC-TCGGC-CCGGC-TCGGC-CCGGC-TCGGC	Design primers
991566	GCGGCGGCGA-AGGGCGGCGA-AGGGCGGCGA	Design primers
1004025	CCG-CCG-CCG-CCG-CCG-TCG-CCG-CCG	Design primers
1010062	TCGGGCACGCTTGGGCACGCCCGGGCGCGC	Design primers
1029705	GCCACGACGG-ACGACGACGG-ACGACGACGG-ACGACGACGG	Design primers
1032223	CCGCCTCACCGCTTCACCGCCTCA	Design primers
1033745	CCGCCGCGGCCGCCGCCGCCGCGGTCGCCG	Design primers
1063392	GCGCAGGCGCGCACGCGCGCGGGC	Design primers
1069143	GCGGCCGGTATAGGC-ACGGCCGGTATAGGC-ACCACCGGTATAGGC	Design primers
1069632	TGCCGAA-CGCCGAA-CGCCGAA-CGCCGAA	Design primers
1073394	TCGATCTCGCTCTCGTTCTCGACC	Design primers
1095016	CGCGGGCATCGTCAGGC-GGCGGGCATCGTCAGGC-GGCGAGCGTCGTCAGGC	Design primers
1104037	GCCGCGCTGCGTCGCGCGGCGCGGC	Design primers
1107664	TGCCGCTTC-GACCGCTTC-GACCGCTTC-GACCGCTTC-GACTGCTTC-GACCGCTTC	Design primers
1110686	CCGGCCGTTTCGCCGTCTGTTTCGCCGGCCGTTTCG	Design primers
1131825	GCCGCATCG-ACCGCATCG-ACCGCATCG-ACCGCATCG	Design primers
1133236	GCGGGGGCGGCGGGCGCGGCGGGGGCC	Design primers
1134485	GCGGGCGGCGGCATGCGGCGGCGGTCGCCG	Design primers
1134615	TTCAATG-CCGAACG-TCGAACG-TCGAACG-TCGAACG-TCGAACG-TCGAACG-CCGAACG-TCGAACG	Design primers
1134717	AGCGC-CGCGC-CGCGC-CGCGC-CGCGC	Design primers
1135398	CGAGC-CGAGC-CGAGG-CGATC-CGGGC	Design primers
1138798	CGCGAGTGCGGC-TGCGAGTGCTGC-TGCGAGTGCTGC-TGCGAGTGCGGC	Design primers
1140073	CATCGAC-CGCGAAC-CGCGAAC-CGCGAAC-CGCGAAC-CGCGAAC-CGCGAAC-CGCGAAC-CGCGAAC-CGCGAAC-CGCGAAC-CGCGAAC-CGCGAAC-CGCGAAC-CGCGAAC	Design primers
1140257	CCCAACA-TGCCAAA-CGCCAAA-CGCCAAA-CGCCAAA-CGCCAAA-CGCCAAA-CGCCAAA-CGCCAAA	Design primers
1140807	GGCGGGGGCGAGGGCGGTGGCGGA	Design primers
1141169	GGCACGCGCGACAGGCGACGCGCGACAGGCGACGCGCGACAG	Design primers
1161562	CGCGCGCGCGGCGCGTCCGCGGCGAACGCGCGG	Design primers
1161925	GGCGTCGACGTCGTCGTCGGCATC	Design primers
1165722	TCATCGTCGTTCGTCGTCATTCGTCGTCGC	Design primers
1172256	CGCATGTTCGACGCGCGTTCGATGCATGTCCGATGCATGTCCGA	Design primers
1175565	GCTGGCCGCGCCGGCCGCGCCGGCCGC	Design primers
1181152	GCGGCTCGTGCGGCTCGGGGGGCTCGT	Design primers
1196408	GCGCGCGTGCGCGTGCGCGCGCGG	Design primers
1197958	CCC-GCC-GCC-GCC-GCC-GCC-GCC-GCC	Design primers
1227034	CGCGTCCGGCCGCGGCCGCCTGCATCCGGC	Design primers
1227634	GCCCGCCCCCGCGGCCGCGCCCTCGACCGC	Design primers
1258560	GATCGGCGAGATGGGCGAGGTCGGCGA	Design primers
1261648	GCGCC-GCGCC-GCGCA-CCGCC-GCGCG	Design primers
1287537	CGGCGGCGACGGCGGCCGCGGCGG	Design primers
1303454	CGGCGAAGAAGGCAGCGGTGAAGAAGGTTGCTGCGAAGAAGGTCG	Design primers
1303545	TGCAGCGAAGAAGGTTGCAGCGAAGAAGGCGCCGGCGAAGAAGGTTGCTGCGAAGAAAGTCGCCGTGAAGAAGGTCGCGGCGAAGAAGGTCGCGGCGAAGAAGGTTGCAGCGAAGAAGGTTGCAGCGAAGAAGGC	Design primers
1303696	GCCGCGAAGAAAGTCGCCGTGAAGAAGGTCGCGGCGAAGAAGGCC	Design primers
1303810	CCCGCGAAGAAGGCT-GCCGCGAAGAAGGCT-GCGCCGAAGAAGGCT-GTCGTGAAGAAGGCT	Design primers
1324938	GGCGGCAGCGGCAGCGGCAGCGGCGGCGGTCGCGGCGGCGGG	Design primers
1345188	GACCGAAGTGACCGAACTGACCGAAGTGACCGAAGC	Design primers
1347883	TCGCAC-GAGCAC-GAGCAC-GAGCAC-GAGCAC-GAGCAC-GAGCAC-GAGCAC	Design primers
1355503	CCGCCGCAGCCGCAGCCGCCGTCGCCGTCGCCGTCGCCGCCC	Design primers
1362071	GTTTGC-GTGTGC-GTGTGC-GTGTGC	Design primers
1368084	GCA-GCA-ACA-GCA-GCA-ACA-GCA-GCA	Design primers
1371538	GCGCCGACGCTCCGACGCTCCGAC	Design primers
1415780	TTTCGGGCTTCCGGGCCTTCGGGC	Design primers
1416089	GGCGCT-GCCGCT-GCCGCT-GCCGCT	Design primers
1416827	GCG-GCG-CCG-GCG-CCG-GCG-CCG-GCG	Design primers
1428606	CCTTGCCG-CTGAGCCG-CTGAGCCG-CTGAGCCG-CTGAGCCG-CTGAGCCG	Design primers
1457311	GCGCCGCCGCGCGCCGCCTCGCGCAGCAGC	Design primers
1501851	CGATCGCCATCGAGATCGCGAACG	Design primers
1506016	GGCGC-GACGC-GGCGC-GGCTC-GACGC	Design primers
1531543	CGCGTCGCGGCTCGTCGTGTCGCGC	Design primers
1552084	CTTCTGCTGTTCGAGCTTTTGTTGCTCGAGCTTCTGCTGTTCGAG	Design primers
1584313	GCGACCTTAAGCGGCCTCAAGCGACCTCAA	Design primers
1604061	GCG-GCG-GCG-ACG-ACG-GCG-GCG-GCG	Design primers
1610085	CGAAGCGT-CGGAGCGT-CGGAGCGT-CGGAGCGT	Design primers
1610230	CGCGGCGCCGCCCGGCGCCGCGCGC	Design primers
1611049	CGCGAAGAAGCCGCAAAGAAGCCGCAAAGCAGC	Design primers
1682354	CGAACACGATCACGAACGCGAACA	Design primers
1694405	TGATGA-TCGTGA-TCGTGA-TCGTGA-TCGTGA-TCGTGA	Design primers
1694448	CGTGCG-AGTGCG-AGTGCG-AGTGCG-AGTGCG	Design primers
1696227	GGTGCCGGTGGCGGGGCCCGTGCC	Design primers
1718269	ACTTGCC-ACTCGCC-ACTCGCC-ACTCGCC	Design primers
1720975	GCGATTCGAACGATTCGAGCGATTCGC	Design primers
1731976	TCTTCGTCTTCGTCGTCCTCGTCTTCCTCGTCCTCTTCGTCGTCG	Design primers
1749806	CG-CC-CG-CG-CT-CG-CA-CC-CG-CG-CG-CG	Design primers
1778139	GCGT-GCGT-ACGT-GCGT-ACGT-GCGT	Design primers
1778876	TTGTTCGT-TTGTTCGT-TCGTTCGT	Design primers
1779986	CCTTGTCTCGCCCTTTCTCTCGCCCCTTCTCTCGCG	Design primers
1808563	GGTCGAGATCGAGCTCGAGGCCGA	Design primers
1809223	GCTCGAGATCGAACTCGAGCGCGA	Design primers
1822801	GCGGCTCGAAGGCTCGAAGGCTCGAAGGCTCGAAGGCTCGAAGGCCCG	Design primers
1840554	GACGCCGATGCCGACGACGACGCG	Design primers
1843160	GCGCACGCGCAGGCGCTCGCGCAG	Design primers
1850812	CGTAATGAGGCAGTAACGAGGCAGTAACGAGGCAGTAATGGGGC	Design primers
1858601	GGCGCGAT-GGCGCGAT-GGCGCGGT	Design primers
1861702	CGCGCA-CGCGCA-GGCGCA-GGCGCA	Design primers
1881449	CGCGCGGCCGCGCGGGCGCGCGTC	Design primers
1885938	CGCATTGAC-CGCATTGAC-CGCATTGGC	Design primers
1886679	CGTCGAGATCGTCGCGATCGTCGCGAT	Design primers
1890483	TCCATCCGCGGCGCTTCCATTCGCGGTGCGGGCATGCGCGGCGCTTCCGTCCTCGGCGCT	Design primers
1891033	GCGGCACGC-CCGGCACGC-CCGGCACGC	Design primers
1896280	CGCGCGCAGCGTGCGCAGCGCGGGCAG	Design primers
1897316	CCGCTTATCCGTTTATCCGCTTATCCGTTTAT	Design primers
1899716	GCGAAGGCCAAGGCGAAGGCGAAG	Design primers
1902934	GCCGAAGCCGATGCCCAAGCTGAA	Design primers
1915879	GCTTCGGCCGGGGCGGCTTCGGCGGGGGCGGTTGCGGCCGGAGCG	Design primers
1916321	CGC-GGC-GGC-CGC-CAC-GGC-GAC-CGC-GGC-GGC-GGC-GGC	Design primers
1916506	CGCTCACCGCGCTCACGGCGCTCGCCG	Design primers
1916578	TCGCGCTGTTCGCGCGGCTCACGGGGTTCGCGCGGCTCGCGTTGTTCGCGCGGT	Design primers
1916919	CGCGGCGGGCGCCGGTGCGGGCGCCGCGGCGGGCTG	Design primers
1936872	TCGGCT-TCGGCT-TCCGCT-GCGGCT	Design primers
1949104	ATGCGGCGGCAAATGGGGTGGCAAATGCGGCGGCCG	Design primers
1953573	GGCCGC-GCCCGC-GCCCGC-GCCCGC	Design primers
1972862	GCGCGGGGGCGGGAGCGGGCGCGA	Design primers
1975859	GAAAGCGAG-AACGGCGAG-AACGGCGAG-AACGGCGAG-AACGGCGAG-AACGGCGAG	Design primers
1978660	TGCCAT-CGCCAT-TGCCAT-TGCCAT-CGCCAT-TGCCAT-CGCCAT-CGCCAT	Design primers
1978718	CCGCCCCCCGTCTTCCCCCCGTCTTCCCCCCGT	Design primers
1985151	GGTGGCTC-AAGGGCTC-AAGGGCTC-AAGGGCTC-AAGGGCTC-AAGGGCTC-AAGGGCTC-AAGGGCTC	Design primers
2024273	GGCGCGGTGCGCCGCAGCGCGTCGC	Design primers
2040794	TCGTT-GTCGC-GTCGC-GTCGC-GTCGC-GTCGC-GTCGC-GTCGC-GTCGC-GTCGC-GTCGC-GTCGC-GTCGC-GTCGC-GTCGC	Design primers
2040871	CGCCACTC-GGCCACTC-GGCCACTC	Design primers
2041094	ACGCGCATTCGCGCATACGCGGAT	Design primers
2042493	CGCGCTGCGCAGCGCCGCGACGCGC	Design primers
2050857	CATAGAT-CCGGCAT-CCGGCAT-CCGGCAT-CCGGCAT-CCGGCAT-CCGGCAT-CCGGCAT-CCGGCAT	Design primers
2055000	GCACGCGCAGGCGCATGCGCACGC	Design primers
2065532	CGCCGCGGCCGCCGCGCCCGCCGCGGG	Design primers
2071774	TTCGCCG-TTCGCCG-CTCGCCG-TTCGCCG-TTCGCCG	Design primers
2073829	CACCGGGCGGCACCGGCCTGCACCGGGCGG	Design primers
2080312	ACGCCGCGACGCCGGGCCGCCGCG	Design primers
2133185	ATCGGT-GTCGGT-GTCGGT-GTCGGT	Design primers
2158338	CGACGAAGACGAGGACGACGACAA	Design primers
2182269	CGATAACG-CGATAACG-CGACAACG	Design primers
2190987	GGCGACGACACGGGCGAGGACACGGGTGACGACGCGGGCGACGACACG	Design primers
2205764	CGCGGC-CGCGGC-CGAGGC-CGTGGC	Design primers
2208074	GGTCGCGCTCGCGGTCGCGGGCGC	Design primers
2218590	CGCGCGCGAGCGCGAGCGCGCTCG	Design primers
2234002	GACGCGGAAGCGGACGCGGACGCG	Design primers
2234830	GCGCCCGCGCCGGCGGCCGCGCCG	Design primers
2238679	CGCGCAGCGCCTCGCCGTGCTGCGC	Design primers
2250979	GGCGCA-GACGCA-GACGCA-GACGCA	Design primers
2259152	GCGCCCGCAGCGCGCGCAGCGCCGGCA	Design primers
2263528	GCCCGAGCGGCCCGCGCGGCCCGTGCG	Design primers
2267354	CGCCGCCGTCGCCGCCGCTGCCGC	Design primers
2294663	GGGGCGCGGCCGGGTGCGGCCGGGCGCGGA	Design primers
2344008	CGACGCGCCGCGACGCAACGCGAAG	Design primers
2347082	CGTTCGAGCGTTCGAACATTCGAG	Design primers
2349878	TCGCGAAAAGGATGGCGAAAAGGCGCGCAAAAAGGA	Design primers
2367845	GCGGTGCGGCGCTGCGGCGGCGCG	Design primers
2379832	CCG-CGG-CCG-CCG-CTG-CGG-CCG-CCG	Design primers
2390885	CGAGCGGGCCGCGCGGGCCGAGGGGGC	Design primers
2401000	CAGCGGCACG-AAGCAGCACG-AAGCAGCACG-AAGCAGCACG	Design primers
2401149	GCGGATTG-CCGCGTTG-CCGCATTG-CCGCATTG-CCGCATTG-CCGCGTTG	Design primers
2403541	CAACGGCGGGCGCACGGCGGGCCAATGGCGTGC	Design primers
2405271	TGCACGCC-GATACGCC-GATACGCC-GATACGCC-GATACGCC-GATACGCC	Design primers
2424691	GGAA-CGCA-GGCA-CGCA-CGAA-CGCA-CGAA-CGCA-CGAA-CGCA	Design primers
2438447	CGTCGATCCATCGATCCGTCGATG	Design primers
2439761	GAAAAGCAGCGGGGAAAAGCGGCGAGGAAAGGCAGCGAG	Design primers
2443475	GCGCGGGCA-TCGCGGGCA-TCGCGGGCA	Design primers
2470893	GGATGCAAGCGGGGCGCAAGCGGGATGCAAGCG	Design primers
2476262	CCGTCGCGC-TCGTCGCGC-TCGTCGCGC	Design primers
2496893	GCCGCCGCG-CCCGCCGCG-CCCGCCGCG	Design primers
2536436	AGGCAACACCGAGGAAACACCGAGGAACCACCG	Design primers
2541108	GTGCAGATGCAGGAGCAGATGCAG	Design primers
2542617	TCGGCGCGCTCGGCGAGCTCGCCGCGC	Design primers
2564031	GCTACGACAACTACGACAGCGACGACA	Design primers
2574502	CGGTGC-CGTCGC-CGTCGC-CGTCGC-CGTCGC-CGTCGC	Design primers
2597105	GCTCGCGCGGATCGCGCGGCTCGAGCG	Design primers
2618467	CATGGACCGCACGGACCGCACGGACCG	Design primers
2628430	CGCCGGCTC-CACCGGCTC-CACCGGCTC-CACCGGCTC	Design primers
2628816	TCGGCGGCGCTCGGCGATGCGCGGCGACGC	Design primers
2631908	TG-CG-CG-TG-AG-CG-TG-CG-CG-TG-AG-CG	Design primers
2668898	TGCCGCACCGCGCCGCACCATGCCCCGCCG	Design primers
2686914	GCGAC-GCGTC-GCGCC-GCGCC-GCGGC	Design primers
2686952	GCCGGGGCCGAGACCGGGGCCGGC	Design primers
2693094	GCGAGTTCGCGCGAGTCCGCGCAAGTCCGC	Design primers
2706584	GCGGCGCTC-GCGGCGCTC-GCGGCGTTC	Design primers
2713054	GGCCGCGGCCGGGGCGGCGGCCAC	Design primers
2717800	CGACGCTGCGCGACGCAACGCGACGGCGCG	Design primers
2718746	GGCCGATTACAACGCCCATTACAACGCCCATTACAAGGCCAACTACAA	Design primers
2727942	CGCGCTCGC-GGCGCTCGC-GGCGCTCGC	Design primers
2736150	TGAGATCCGGGT-TGAAATTCGGGT-TGAAATTCGGGT-TGAAATTCGGGT	Design primers
2743590	TGCGTTCGCGACATG-CGCGTTCGCGACATG-CGCGTCCGCGACGTG	Design primers
2763242	GG-CG-CG-GG-CG-CC-GC-CG-CG-AG-CG-CG	Design primers
2766177	CCGCGTTGCCAGCGTTGCCCACGTTGC	Design primers
2768365	GGGCCAAGCAGGACCAAGCAGGACCACGCA	Design primers
2806001	GGCGACCGGCACGACGACCGTCACGCCGACCGGCAC	Design primers
2818366	CGCGCAT-CTCGCAT-CTCGCAT-CTCGCAT	Design primers
2831171	AGCGCGATC-AGCGCGATC-AGCGCGAGC	Design primers
2836080	GCGAGCGCGCGCGCGAGCGCGATC	Design primers
2837486	ATTCACGGCCGGATTCACGGCTGAAATCGCGGCCGG	Design primers
2837827	CGAGCGCGCGCGCGAACGCGAGCG	Design primers
2844232	TCGGCCTCGGTCTCGGGCTCGGGC	Design primers
2858650	GCGCGACGCGGCGCTGCGCCGTGCG	Design primers
2894659	CGCGCCCACGCCCGCGCCCGCGCC	Design primers
2904603	CGGGCGGCTCGGGCGGCACGAGCGGCT	Design primers
2904675	CGGGCGGCGGCGGCTCCACCTCCGGCGGCGGCTCCACCTCCGGCGGCGGCTCCA	Design primers
2906221	GCACCAGCGGGACCAGCGGCACGAGCGGCACCAGTGGCACGAGCGGCACCAGCG	Design primers
2923436	GCGCCGACGCCGACGCCGGCGCCGGCGGCG	Design primers
2959821	CTCCGGCTCGGGCTCGGGCGCCGG	Design primers
2968713	TCGCGCG-CGGTTCG-CGGTTCG-CGGTTCG-CGGTTCG-CGGTTCG-CGGTTCG-CGGTTCG-CGGTTCG	Design primers
2975601	GTCGTCGTCGGCTTCGTCGTCGGC	Design primers
2981266	CTTCGTCCGCTTCGTTCGCTTCGTTCG	Design primers
2989973	GT-CG-CG-GC-CG-CG-CT-CG-CG-GG-CG-CG	Design primers
3023681	ACGATG-ACGATG-GCGATG-ACGATG	Design primers
3029209	GACGCATCGATGCATCGACGCATCGACGCATC	Design primers
3032216	GTCGCCGCG-TTGGCTGCG-TTGGCTGCG-TTGGCTGCG-TTGGCTGCG-TTGGCTGCG-TTGGCTGCG-TTGGCTGCG	Design primers
3034486	AACGGCACGAAAACGCGACGAAAACGCCACGGAACCGGCACGAA	Design primers
3035514	TGCGCGCGGTGCGCGCGCGGCGCGCGG	Design primers
3054683	GCGTCGCGCGCGTCGAGCGCGGCGCGC	Design primers
3055137	CCGTGCG-CCGTGCG-CCGCGCG-CCGCGCG	Design primers
3065148	CCACGTCGGCCATGTCGGCCGCGTCGG	Design primers
3173823	TCGCGAACGGGCATGTCTCGAACGCGCATGTCGCCGACGCGCATG	Design primers
3173871	CCGACGCGCACGTCC-CGAACGGGCACGTCC-CGAACGGGCACGTCC-CGAACGGGCACGTCC-CGAACGGGCACGTCC-CGAACGGGCACGTCC-CGAACGGGCACGTCC-CGAACGGGCACGTCC-CGAACGGGCACGTCC-CGAACGGGCACGTCC	Design primers
3207243	GCGGACGGCGAACGGCGAACGGCGGGCG	Design primers
3209968	GCCCGCG-CCTTCCG-CCTTCCG-CCTTCCG-CCTTCCG-CCTTCCG-CCTTCCG-CCTTCCG-CCTTCCG-CCTTCCG-CCTTCCG-CCTTCCG	Design primers
3210053	CTTCCGA-CTTCCGA-CTTCCGA-CTTCCGA-CTTCCGA-CTTCCGA-CTTCCGA-CTTCCGA-CTTCCGA-CTTCCGA	Design primers
3214612	GCGGTC-GGTGTC-GGTGTC-GGTGTC-GGTGTC-GGTGTC	Design primers
3214786	ATGCTCGAC-GCACTCGAC-GCACTCGAC-GCACTCGAC-GCACTCGAC-GCACTCGAC-GCACTCGAC-GCACTCGAC-GCACTCGAC-GCACTCGAC	Design primers
3215276	CACCGA-TGCCGA-CGCCGA-CGCCGA-CGCCGA-CGCCGA	Design primers
3225525	CGCGCGGCCCGCGCGCGCCCGGCGCGAGGCGCG	Design primers
3225983	GCATCGCTTCGACGACTTCGCTTCGACGGCCTCGCTTCGACGGCCTCGCTTCGACG	Design primers
3236351	GAAACCGCT-CAACCGGCT-CAACCGGCT-CAACCGGCT-CAACCGGCT-CAACCGGCT-CAACCGGCT-CAACCGGCT	Design primers
3246873	CGAGGCGCACGATGCGCACGACGCGCA	Design primers
3246934	CCTTCGCTTCCCGTCGCATCCACTCGCTTC	Design primers
3249064	GGGTTCGGTCAGGATTCGATCAGGGCTCGGTCA	Design primers
3251000	TCTCGCCGCTCTCACGCCGCTCTCACGCCGCGCCTTCGCCGCTC	Design primers
3251544	TCGCGC-TCGCGC-GCGCGC-TCGCGG	Design primers
3252175	CGTCGTG-CGCCGTG-CGCCGTG-CGCCGTG	Design primers
3253100	GCTGATCG-ACTGATCG-ACTGATCG	Design primers
3259220	TCGCTTGGGTCGTTGCTTGGGTCATGGCATGGGTCG	Design primers
3259350	AGCGGCGTTAGTCGTTGCGTTAGTCGTTGCGTTAGTCGTTGCGTTAGTCGTTGCGTTAGTCGTTGCGTTGGT	Design primers
3260737	TTCGACATCGCATCCTTCGACATCGCGTCGCGAGACATCGCATCC	Design primers
3267652	CGTTTCCG-CGTTTCCG-CGTTTCTG	Design primers
3273242	GCGCGCGCACGCGCGAGCCCGCGC	Design primers
3274980	GCGAGCGGCGCGAGCTGCTCGAGCGGC	Design primers
3277740	AGCCGCGGCGAGCCGCGCCACGGCGCGGCG	Design primers
3285980	TC-GC-GC-TC-GC-CC-GC-GC-GC-TC-GC-GC	Design primers
3286346	GCTCGCCGG-AATCGCCGG-AATCGCCGG-AATCGCCGG-AATCGCCGG-GATCGCCGG	Design primers
3288998	CCCGCGCCCCTCGCGCCCCTCGCGCCC	Design primers
3295414	AGCGCATCG-GGCGCATCG-GGCGCATCG-GGCGCATCG	Design primers
3298675	GCTCGCGCTCGGGATCGCGCTCGC	Design primers
3302999	CTCGCCGCGACACGCCGAGATTCGTCGCGA	Design primers
3316836	CGGACG-CCGACG-CCGACG-CCGACG-CCGACG	Design primers
3350468	TCTGC-TCGGC-GCTGC-GCTGC-TCGGC	Design primers
3360061	CGCCGTTC-GCTCGTTC-GCTCGTTC-GCTCGTTC-GCTCGTTC-GCTCGTTC	Design primers
3360151	CGATCGCGAACGCGAACGCAATCG	Design primers
3378888	ACCGCCGCCAAGCCTGCCGCCAAGGCCGCCGCCAAA	Design primers
3468723	GGCATT-GGCGTT-GGCGTT-GGCGTT	Design primers
3477226	AGGCGCGCGGCGGCGCGCGCCGGCGCCCGG	Design primers
3532167	TCCAATC-GTCGGTC-GTCGGTC-GTCGGTC-GTCGGTC-GTCGGTC-GTCGGTC-GTCGGTC-GTCGGTC-GTCGGTC-GTCGGTC-GTCGGTC	Design primers
3542182	GTCGGCATCGGTCGACATCGATCCGCATCG	Design primers
3545120	GCGCCGG-CAAGCGG-CAAGCGG-CAAGCGG-CAAGCGG-CAAGCGG-CAAGCGG-CAAGCGG-CAAGCGG-CAAGCGG-CAAGCGG-CAAGCGG-CAAGCGG-CAAGCGG-CAAGCGG	Design primers
3553947	GCA-GCG-GCG-GCG-GCG-GCG-GCG-GCG	Design primers
3563381	GCGCACGTCGAT-ACGCACGTCGAT-ACGCACGCCGAT-ACGCACGTCGAT	Design primers
3564317	TCGTGCCGCTTTGAGCCGCTTCGTGCCGAG	Design primers
3598781	CCGACGCGC-CCGACGCGC-CCGGCGCGC	Design primers
3618575	GCGGCAGCGACAGCGGCCGCAGCA	Design primers
3621030	GCCGCCGTCGCCGCCGCCGCCGCA	Design primers
3626170	GACGCG-GATGCG-GACGCG-GACGCG-GATGCG	Design primers
3690732	CGC-CGC-CAC-CGC-GGC-CGC-CGT-CGC-CGC-CGT-CGC-CGC	Design primers
3701162	GAGTGCGGATGAAGTGCGAATGAAGTGCGGAGG	Design primers
3701261	AGAGATCGGAGAGATCGAAGAGATCCGAGAGATCGA	Design primers
3718495	GG-GC-GC-GG-GG-GC-GA-GC-GC-GT-GC-GC	Design primers
3726221	GATCCCGGAACGAACCCGGGCACGAATCCCGGAACCAACCCGGGCACGAATCCGGGAGCCAACCCGGGCACG	Design primers
3726294	ATCCGGGCACGAATCCGGGAACCAACCCGGGTACGA	Design primers
3740472	CCGCATCGGGCGCATCGGGCGCATCGGCTGCATCGGCCGCCTCGG	Design primers
3744035	CCGCGATACTGTCGCGATAATGCCGCGATCCTG	Design primers
3745622	CGGCCG-CGGCCG-CCGCCG-CGACCG	Design primers
3747044	CGGCGT-GGTCGT-GGTCGT-GGTCGT-GGTCGT-GGTCGT-GGTCGT-GGTCGT	Design primers
3751322	GGTCGGCG-TGTCGGCG-TGTCGGCG	Design primers
3756462	ACCGCGAACGCGCCCGCGACCGAG	Design primers
3794866	TTCCGATCCTTTGCCGATCCTTTGCCGATTCTT	Design primers
3800014	CGCCGGCGGC-ACCCGGCGGC-ACCCGGCGGC-AGCCGGCGGC-AGCCGGCGGC	Design primers
Search your sequence for microsatellites

This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.

Info

Percentaje of mismatches allowed within the tandem repeats: 0 | 0.1 | 0.2

Position

Sequence

40845

CGCGCCGTGCCGTGCCGCCCCTCGC