Microsatellites /Tandem Repeats database

Genome: Methanospirillum hungatei JF-1

Search your sequence for microsatellites

This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Info

Percentaje of mismatches allowed within the tandem repeats: 0 | 0.1 | 0.2
 
PositionSequence 
869515GTTCACAAATTCCATGTTTACAAATTCCATGTTTACAAATTCCATDesign primers
1392244TACCTTTCTCGA-TTCCTTTCTCGA-TTCCTTTCTCGA-TTCCTTTCTCGADesign primers
1599177AAGGCTGAAGGGAAAGCTGAAGGGAAAGCTGAAGGGDesign primers
1729615TCCGGAAATGA-TCCGGAAATGA-TCCGGAAGTGADesign primers
1918678ACATTAGGACTTCAAAAGGAAACATTAGAACTTCAGAAGGAAACATTAGAACTTCAGAAGGAADesign primers
2920466AA-AA-AA-AA-AA-AA-AA-AA-AA-AA-AA-AA-AA-AADesign primers
3344243GCCAACATCTGATCCTGTTTATCCAGCATCTGATCCTGTTTATCCAGCATCTGATCCTGTTTATCCAGCATCTGATCCTGTTTATCCAGCATCTGATCCTGTTTATCCAGCATCTGATCCTGTTTATCCAACATCTGATCCTGTTTATCCAACATCTGATCCTGTTTGDesign primers

Please help us improve this resource by reporting problems, suggestions etc.