This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Percentaje of mismatches allowed within the tandem repeats:
0 |
0.1 |
0.2
| Position | Sequence | |
| 1214451 | GCCCATGCC-GCCCATGCC-GCCCATGCC | Design primers |
| 1244797 | ACAAGAAAGCCGCTGAAGACAAGAAAAAAGCCGCTGAAGACAAGAAGAAAGCTGCTGAAGACA | Design primers |
| 1442860 | CAAGAGAATTCAAGAGAGTTCAAGAGAATT | Design primers |
| 1486102 | TCAGAA-GCAGAA-GCAGAA-GCAGAA-GCAGAA-GCAGAA-GCAGAA-GCAGAA | Design primers |
| 1648957 | CCAGCA-CCAGCA-CCAGCA-CCAGCA-CCAGCA-CCAGCA-CCAGCA-CCAGCA | Design primers |
| 1714520 | GGAGTC-GGAGTC-GGTGTC-GGTGTC-GGTGTC-GGTGTC-GGTGTC-GGTGTC-GGAGTC-GGAGTC-GGAGTC-GGAGTC-GGAGTC-GGAGTC-GGAGTC-GGAGTC-GGAGTC-GGAGTC-GGAGTC-GGAGTC | Design primers |
| 1857834 | GCCGCCACGTCC-GTCACCACGTCC-GTCACCACGTCC-GTCACCACGTCC-GTCACCACGTCC-GTCACCACGTCC | Design primers |
| 3043194 | CCGCGC-CCGCGC-CCGCGC-CCGCGC | Design primers |
| 3134620 | TTTCGTCAG-TTTCGTCAG-TTTCGTCAG | Design primers |
| 3628821 | GGTGGC-GGTGGC-GGTGGC-GGTGGC | Design primers |
| 3720062 | GAAGAAAGCTGCACCAGC-CAAGAAAGCTGCACCAGC-CAAGAAAGCTGCACCAGC | Design primers |
| 3720117 | AAGAAAGCTGCACCGGCT-AAGAAAGCTGCACCGGCT-AAGAAAGCTGCACCGGCT-AAGAAAGCTGCACCGGCT | Design primers |
| 3720204 | GCCAAGAAAGCTGCACCAGCCAAGAAAGCTGCACCGGCTAAGAAAGCTGCACCAGCCAAGAAAGCTGCACCG | Design primers |
| 3720277 | CTAAGAAAGCTGCACCGG-CTAAGAAAGCTGCACCGG-CTAAGAAAGCTGCACCGG-CCAAGAAAGCTGCACCGG-CCAAGAAAGCTGCACCGG-CTAAGAAAGCTGCACCGG-CTAAGAAAGCTGCACCGG-CTAAGAAAGCTGCACCAG | Design primers |
| 3720438 | GCTAAGAAAGCTGCACCG-GCTAAGAAGGCTGCACCG-GCTAAGAAGGCTGCACCG-GCTAAGAAGGCTGCACCG-GCTAAGAAGGCTGCACCG-GCTAAGAAAGCTGCACCG | Design primers |
| 3865270 | GGGTCATCAACCACCGGGTCATCGACCACCGGGTCATCAACCACTGGGTCATCAACCACT | Design primers |
| 4559592 | CCGCAGGTACAG-CAGTAGGTACAG-CAGTAGGTACAG-CAGTAGGTACAG-CAGTAGGTACAG-CAGTAGGTACAG-CAGTAGGTACAG-CAGTAGGTACAG-CAGTAGGTACAG-CAGTAGGTACAG | Design primers |
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