Microsatellites /Tandem Repeats database

Genome: Methanococcoides burtonii DSM 6242

Search your sequence for microsatellites
This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Info
Percentaje of mismatches allowed within the tandem repeats: 0 | 0.1 | 0.2
 
PositionSequence 
29458ATTG-ATTG-ATTG-ATTG-ATTG-ATTG-ATTG-ATTG-ATTG-ATTGDesign primers
61370TTCAATTCA-TTCAATTCA-TTCAATTCA-TTCAATTCADesign primers
207891ATTT-ATTT-ATTT-ATTT-ATTT-ATTTDesign primers
285655GAAT-GAAT-GAAT-GAAT-GAAT-GAATDesign primers
287539ATATT-ATATT-ATATT-ATATT-ATATT-ATATTDesign primers
292347ATA-ATA-ATA-ATA-ATA-ATA-ATA-ATA-ATADesign primers
321958TGTATTGC-TGTATTGC-TGTATTGC-TGTATTGCDesign primers
325358TATTA-TATTA-TATTA-TATTA-TATTA-TATTADesign primers
503702CTTGCGCGGTAG-CTTGCGCGGTAG-CTTGCGCGGTAG-CTTGCGCGGTAG-CTTGCGCGGTAGDesign primers
530375TTCTCATT-TTCTCATT-TTCTCATTDesign primers
713459ATCAGAAAA-ATCAGAAAA-ATCAGAAAADesign primers
1435695TAAC-TAAC-TAAC-TAAC-TAAC-TAAC-TAACDesign primers
1861556AGGGAAACAAGATCACCT-AGGGAAACAAGATCACCT-AGGGAAACAAGATCACCTDesign primers
2247820AAGA-AAGA-AAGA-AAGA-AAGA-AAGADesign primers
2502870ATTTAATAATGCT-ATTTAATAATGCT-ATTTAATAATGCT-ATTTAATAATGCT-ATTTAATAATGCT-ATTTAATAATGCT-ATTTAATAATGCTDesign primers

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