Microsatellites /Tandem Repeats database

Genome: Myxococcus xanthus DK 1622

Search your sequence for microsatellites
This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Info
Percentaje of mismatches allowed within the tandem repeats: 0 | 0.1 | 0.2
 
PositionSequence 
213138GGGCGCGCT-GGGCGCGCT-GGGCGCGCTDesign primers
433298GACGCGGGCACGGATGCCGGTACG-GACGCGGGCACGGATGCCGGTACG-GACGCGGGCACGGATGCCGGTACGDesign primers
624075CCGGAGAATCCGGAC-CCGGAGAATCCGGAC-CCGGAGAATCCGGACDesign primers
918184GCC-GCC-CCC-GCC-GCC-CCC-GCC-GCC-CCCDesign primers
1933712ACTC-ACTC-ACTC-ACTC-ACTC-ACTC-ACTCDesign primers
2103447AAGCAC-AAGCAC-AAGCAC-AAGCACDesign primers
2376626CTGGCGGAAGAGGCTCGT-CTGGCGGAAGAGGCTCGT-CTGGCGGAAGAGGCTCGT-CTGGCGGAAGAGGCTCGTDesign primers
2377469CTGGCGGAAGAGGCTCGT-CTGGCGGAAGAGGCTCGT-CTGGCGGAAGAGGCTCGT-CTGGCGGAAGAGGCTCGTDesign primers
2436447GGCCCT-GGCCCT-GGCCCT-GGCCCT-GGCCCT-GGCCCT-GGCCCT-GGCCCT-GGCCCTDesign primers
2963300CGC-CGC-CGC-CGC-CGC-CGC-CGC-CGCDesign primers
3079480CCGCTC-CCGCTC-CCGCTC-CCGCTCDesign primers
3213369CACGAC-CACGAC-CACGAC-CACGACDesign primers
6580375GACGCGGGCATTGAGCCG-GACGCGGGCATTGAGCCG-GACGCGGGCATTGAGCCGDesign primers
6580543GAGCCCGACGCTGGCACA-GAGCCCGACGCTGGCACA-GAGCCCGACGCTGGCACADesign primers
6864262GAGCCC-GAGCCC-GAGCCC-GAGCCC-GAGCCCDesign primers
7646529AACGGCACTGAGCAGGCC-AACGGCACTGAGCAGGCC-AACGGCACTGAGCAGGCCDesign primers
7856098CTCCCCTTCGGCGAACGGGTCGAC-CTCCCCTTCGGCGAACGGGTCGAC-CTCCCCTTCGGCGAACGGGTCGACDesign primers
7858563CCTCGT-CCTCGT-CCTCGT-CCTCGTDesign primers
8309704GCCGACGG-GCCGACGG-GCCGACGGDesign primers
8993106CGGGCGGA-CGGGCGGA-CGGGCGGADesign primers

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