Microsatellites /Tandem Repeats database

Genome: Myxococcus xanthus DK 1622

Search your sequence for microsatellites
This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Info
Percentaje of mismatches allowed within the tandem repeats: 0 | 0.1 | 0.2
 
PositionSequence 
213138GGGCGCGCT-GGGCGCGCT-GGGCGCGCTDesign primers
433295CCCGACGCGGGCACGGATGCCGGTACGGACGCGGGCACGGATGCCGGTACGGACGCGGGCACGGATGCCGGTDesign primers
624069CCGGAGCCGGAGAATCCGGACCCGGAGAATCCGGACCCGGAGAATDesign primers
665045GCCGAGGAGAAGGCCGAGGAGACGGCCGAGGAAAAGDesign primers
826119GGCGGCGAGGAGCCGGATGCCGGCAGTGGCGAGGAGCCGGATGCCGGCGGTGGCGAGGAGCCGGATGCTGGCAGTGGCGAGGAGCCGGATGCCGGCDesign primers
918184GCC-GCC-CCC-GCC-GCC-CCC-GCC-GCC-CCCDesign primers
1707228CCACCGACCACGCCACCGACGACGCCGCCGACCACGDesign primers
1933712ACTC-ACTC-ACTC-ACTC-ACTC-ACTC-ACTCDesign primers
2103447AAGCAC-AAGCAC-AAGCAC-AAGCACDesign primers
2376604TCGACTGGCGGAAGAGGC-TCGACTGGCGGAAGAGGC-TCGTCTGGCGGAAGAGGC-TCGTCTGGCGGAAGAGGC-TCGTCTGGCGGAAGAGGCDesign primers
2376737GCGGAAGAGGCTCGTCTCGCGGAAGAGGCTCGACTCGCGGAAGAGGCTCGTCTCDesign primers
2377447TCGACTGGCGGAAGAGGC-TCGACTGGCGGAAGAGGC-TCGTCTGGCGGAAGAGGC-TCGTCTGGCGGAAGAGGC-TCGTCTGGCGGAAGAGGCDesign primers
2377562GCGGAAGAGGCTCGTCTC-GCGGAAGAGGCTCGACTC-GCGGAAGAGGCTCGACTC-GCGGAAGAGGCTCGTCTCDesign primers
2436446CGGCCC-TGGCCC-TGGCCC-TGGCCC-TGGCCC-TGGCCC-TGGCCC-TGGCCCDesign primers
2530360TCTGGCGGAACGCCCGCGTCATCTGGAGGGACGCCCGCGTCATCTGGCGGAACGCCCGAGTCTDesign primers
2963300CGC-CGC-CGC-CGC-CGC-CGC-CGC-CGCDesign primers
3018286GACGCGGGCACGGGTGACGCGGGTACGGGTGACGCGGGCACGGGTDesign primers
3079480CCGCTC-CCGCTC-CCGCTC-CCGCTCDesign primers
3213369CACGAC-CACGAC-CACGAC-CACGACDesign primers
6559016AC-AC-TC-GC-AC-TC-CC-AC-TC-GC-AC-TC-CC-AC-TC-GC-AC-TCDesign primers
6580370AGCCCGACGCGGGCATTGAGCCGGACGCGGGCATTGAGCCGGACGCGGGCATTGDesign primers
6580477GACGCAGGCACTGAGCCG-GACGCAGGCACTGAGCCG-GACGCAGGCACTGAGCCCDesign primers
6580540ACCGAGCCCGACGCTGGC-ACAGAGCCCGACGCTGGC-ACAGAGCCCGACGCTGGC-ACAGAGCCCGACGCTGGCDesign primers
6783633CCGAGCCCGACGCGGGCA-CCGAGCCCGACGCGGGCA-CCGAGCCCGATGCGGGCADesign primers
6864262GAGCCC-GAGCCC-GAGCCC-GAGCCC-GAGCCCDesign primers
7646474GCAGGCCAACGGCACGCAGGCAAACGGCACGCAGGCAAACGGCACDesign primers
7646527CAAACGGCACTGAGCAGGCCAACGGCACTGAGCAGGCCAACGGCACTGAGCAGGDesign primers
7856076CCTCTTCGGCGAACGGGTCGATCT-CCCCTTCGGCGAACGGGTCGACCT-CCCCTTCGGCGAACGGGTCGACCT-CCCCTTCGGCGAACGGGTCGACCTDesign primers
7858563CCTCGT-CCTCGT-CCTCGT-CCTCGTDesign primers
8233669CCGCCCGTAGTGCCCGAGCCGCCCGCAGTGCCCGAGCCGCCCGCAGTGCCCGAGDesign primers
8235434GCCGCCGGCTTCGCCTTCCGTGCTGCCGACTTCGCCTTCCGTGCCGCCGGCTTCGCCTTCGGADesign primers
8309704GCCGACGG-GCCGACGG-GCCGACGGDesign primers
8858647GCAGACCTTCAAGGCGCGGACCTTCAAGGCGCGGACCTTCAAGGCDesign primers
8993106CGGGCGGA-CGGGCGGA-CGGGCGGADesign primers

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