This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Percentaje of mismatches allowed within the tandem repeats:
0 |
0.1 |
0.2
| Position | Sequence | |
| 244120 | TAGTTG-TGGTTG-TGGTTG-TGGTTG-TGGTTG-TGGTTG | Design primers |
| 349138 | TACTGCCTC-AACTGCCTC-AACTGCCTC-AACTGCCTC-AACTGCCTC-AACTGCCTC-AACTGCCTC-AACTGCCTC-AACTGCCTC-AACTGCCTC-AACTGCCTC-AACTGCCTC-AACTGCCTC-AACTGCCTC-AACTGCCTC-AACTGCCTC-AACTGCCTC-AACTGCCTC-AACTGCCTC-AACTGCCTC-AACTGCCTC-AACTGCCTC-AACTGCCTC-AACTGCCTC-AACTGCCTC-AACTGCCTC | Design primers |
| 403846 | TTGTGGTTCAGCGTGGTGGTTCAGCGTGGTGGTTCAGCG | Design primers |
| 518426 | CCTTGCT-GCTTGCT-GCTTGCT-GCTTGCT-GCTTGCT-GCTTGCT-GCTTGCT-GCTTGCT | Design primers |
| 551966 | AAATGATT-ACCTGATT-ACCTGATT-ACCTGATT-ACCTGATT-ACCTGATT-ACCTGATT-ACCTGATT-ACCTGATT-ACCTGATT-ACCTGATT-ACCTGATT-ACCTGATT-ACCTGATT-ACCTGATT-ACCTGATT-ACCTGATT-ACCTGATT-ACCTGATT-ACCTGATT-ACCTGATT-ACCTGATT-ACCTGATT-ACCTGATT-ACCTGATT-ACCTGATT-ACCTGATT-ACCTGATT-ACCTGATT-ACCTGATT | Design primers |
| 1033053 | GCCACCATC-GGCACCATC-GGCACCATC-GGCACCATC-GGCACCATC-GGCACCATC-GGCACCATC-GGCACCATC-GGCACCATC-GGCACCATC-GGCACCATC-GGCACCATC | Design primers |
| 1584441 | TACCTGTGT-TGCCTGTGT-TGCCTGTGT-TGCCTGTGT-TGCCTGTGT-TGCCTGTGT-TGCCTGTGT-TGCCTGTGT | Design primers |
| 1989880 | TGTCGA-TGTCGA-TGTCGA-TGTCGA-TGTCGA | Design primers |
| 2137188 | GGAGCAAACAAAGAGCAAACAAGGATCAAACAA | Design primers |
| 2241303 | ATCATT-ATCATT-ATCATT-ATCATT | Design primers |
| 2258708 | AAGGACTGAACCTAAAAGGACTTAACCTAAAAGGACTTAACCTAA | Design primers |
| 2662711 | GCCAGCAA-GGCTGCAA-GGCTGCAA-GGCTGCAA-GGCTGCAA-GGCTGCAA-GGCTGCAA-GGCTGCAA-GGCTGCAA-GGCTGCAA-GGCTGCAA-GGCTGCAA-GGCTGCAA-GGCTGCAA-GGCTGCAA-GGCTGCAA-GGCTGCAA-GGCTGCAA-GGCTGCAA-GGCTGCAA-GGCTGCAA | Design primers |
| 2681541 | ACAGTTG-GCAGTTG-GCAGTTG-GCAGTTG-GCAGTTG-GCAGTTG | Design primers |
| 2800784 | CCATGA-CCATGA-CCATGA-CCATGA-CCATGA | Design primers |
| 2916635 | GGCCAAGGTTGA-AGCCAAGGTTGA-AGCCAAGGTTGA | Design primers |
| 3238548 | TGAAAAAA-TGAAAAAA-TGAAAAAA | Design primers |
| 4579687 | ACAG-ACAG-AGAG-ACAG-AGAG-ACAG-AGAG-ACAG-AGAG-ACAG-AGAG-ACAG-AGAG-ACAG-AGAG-ACAG | Design primers |
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