Microsatellites /Tandem Repeats database

Genome: Thermofilum pendens Hrk 5

Search your sequence for microsatellites
This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Info
Percentaje of mismatches allowed within the tandem repeats: 0 | 0.1 | 0.2
 
PositionSequence 
258670CTTTTCCTTCTCCTTCTCCTCTTCDesign primers
410567AGGTGAAGGTAAAGGTCAAGGTGGDesign primers
428751CTTTTTCCCGTTTTCCCTTTTTCCDesign primers
625115TGAGGGGTGTTGAGGGCGGTTGAGGAGTCTDesign primers
792414GAGGAGGAATGGGAGGAGGAAGAGGAAGAAGAATGGDesign primers
792486GAAGAGGAGGAAGAGTGGGAGGAGGAAGAGGAAGAAGAGGAAGAGDesign primers
826875CCGAGGAGAAGAAGGAGGAGAAGAAAGAGGAGAAGADesign primers
946000AAG-AAG-GAG-AAG-AAG-GAG-GAG-AAGDesign primers
980121GGGGGGAGGGTGGGCGAGGGCTGGGGAGGGDesign primers
1016590GAGCTGGAGAGGTGGAGAGCTTGADesign primers
1216581GACAAGAGGATAGACTCACTGGATAAAAGGATAGAGTCCCTGGACAAGAGGATAGACAGCCTGDesign primers
1238601AGGTGAAGGTAAAGGTCAAGGTGGDesign primers
1514348GTAATACTGGTAATGCTGGTAGTACTGDesign primers
1680812GGGGCTAGCGGGGCGAGCGCGGCTAGCDesign primers

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