Microsatellites database

Microsatellites /Tandem Repeats database

Genome: Saccharopolyspora erythraea NRRL 2338

This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.

Info

Percentaje of mismatches allowed within the tandem repeats: 0 | 0.1 | **0.2**
Position	Sequence
116633	CCGACCCGACCGGCACGCGACCTGCCCGGCACGCGACCTGCCCGGCAC	Design primers
117971	ACGCCGACGGCGTCGCCGACGCCG	Design primers
126012	GCCGCGGCCGGGGCCGCTGCCGTG	Design primers
127306	GTCGTCATGGTCGGCGTCGTGGTCGTCGTCATCGTC	Design primers
134020	GGCCCCGGACCCGGCCGCAGCCCC	Design primers
142035	CAGACCGGAGGCAGACCGCTGGCGGACCGGCGG	Design primers
143529	CGCCGAGCCGCACCGACGGCCGAGCCGTACGGACCGCTGAGCTGCACCGAC	Design primers
148599	TCGACAGCAACT-CCGACAGCAACT-CCGACAGCGACA-GCGACAGCAACT-CCGACAGCGACA-GCGACAGCAACT	Design primers
148694	GGCGACGCCGACGTCGACAGCGAC	Design primers
206383	CGGCGCTGCGCGGGGCCGCGCGGCT	Design primers
249218	CACAAG-CCCAAG-CCCAAG-CCCAAG	Design primers
277074	GGTGGGACGGCTGGGACGGCTGGGACG	Design primers
298005	CGGTCCCGGTGCCGGACCCGGTCG	Design primers
394737	TCGACGTCGTCGTCGAAGGCGACG	Design primers
421116	GTCCAAGAGCACGGCGTCCAAGAGCACGTCGAGCAAGACCACGGC	Design primers
438577	CGGCGGAGGCCGCGGAGGCGGCGGAGT	Design primers
438997	CGGAAGCAGAGGTCGCTGACGAAGCAGAGGCCGCTGAGGAAGCAGAGGCCGCTG	Design primers
443052	CCGCCGCCGCGCTCCGCCGCCGCGCCGATCCGGCGCCGTCGCGCTCCG	Design primers
454370	CCGTTTCCGTCTCAGGACCAGGCCCCGTTCCCGTCGCAGGACCAAGGCCGGTTCCCGTCCCAGGACCAGGTC	Design primers
460953	TC-GC-GC-TC-GG-GC-TC-GC-GG-GC-GC-GC	Design primers
501741	GCCCACGCCCTCCCAGGCCCACGCACGCCC	Design primers
503794	CGCCGA-CGCCGA-CACCGA-CACCGA	Design primers
505460	GTGGTCGTGGCCGTGCTCGTGGGC	Design primers
505534	GGTCGTGGCCGTGCTCGTGCTCGT	Design primers
521898	CCGTCCCAGCCGTCCCAAGCGTCCCAG	Design primers
522051	GGTGGGACGGCTGGGACGGCTGGGACG	Design primers
524644	GGGGTTTG-CGGGTTTG-CGGGTTTG	Design primers
544091	GTGGTGGGCCAGGTGAGCCCCCGCGCGGTGGGCCAGTTGACCCGCCGCGCGGTGGGCCAGTTGACCCGCCGCGTGGTGGGCCTGCTGAGCCCCCGC	Design primers
561473	ATCGGCACCGGCCTCGGCATCCGC	Design primers
569627	CGC-AGC-CGC-AGT-CGC-CGC-CGC-CGC	Design primers
583569	ATCGCCGCCACCGCCGCCATCTCCGCC	Design primers
604923	TGGTCCTCGTGGTCGTCGTGATCCTCG	Design primers
618148	TCGATGCCGTCGATCTCGCAGCCGATGTCGCCGATCTCGCAGTCCATGCCGTCGATCTCCGGG	Design primers
626615	GGGTCT-GGGTCT-TGGTCT-CGGTCT	Design primers
627731	GC-GC-GC-GG-GC-GC-GG-GC-GC-GC-GG-GC	Design primers
648601	CCGGAGTGTGGCCGTCGACCGGAGCGTGGCCTTCGACCTGGGTGTGCCCGTCGA	Design primers
700685	ACCACG-ACCACG-GCCACG-AGCACG	Design primers
700710	CGGCAA-CGGCCA-CGGCCA-CGGCCA	Design primers
705728	CGTTCCTGGTCGCGTTCCTCGTGGCGTTCCTGACCG	Design primers
722320	AGGCCCCCAAGCC-AAGCCGCCAAGCC-AAGCCGCCAAGCC-AAGCCCCCAAGCC	Design primers
740110	TCGTCCCG-GCTGCCCG-GCTGCCCG-GCTGCCCG-GCTGCCCG-GCTGCCCG	Design primers
751796	GGCCGGG-AGCCGGG-AGCCGGG-AGCCGGG-AGCCGGG	Design primers
775810	CGGCTG-CGGCTG-TGGCTG-CTGCTG	Design primers
843620	CCAGCGGT-TCCGAGGT-TCCGAGGT-TCCGAGGT-TCCGAGGT-TCCGAGGT	Design primers
856792	GTCCGGGCAGTCGCA-GCCCGGACAGTCGCA-GCCCGGACAGCCGCA-GCCCGGGCAGTCGCA	Design primers
857237	CACCCCGGCCAGAGCCACCAGCCGGGCGAGAGCCACCAGCCGGGCCAGAGCCAC	Design primers
862822	CAGACGTGGAAGTGGACCCAGGCGCGGAAGTGGACCCAGGCGTGGAAGCGGGCC	Design primers
862877	AGGCGTGGAAGCGGGCCG-AGGCGTGGAAGCGGGCCG-AGGCGTGGAAGCGGGCGA	Design primers
881424	GGTCGGCCGGGGTCGGCGGACGTCGGTCGG	Design primers
927683	CCGCCTGCCGGGGTCGCCCGCCGGGGTCGCCTGCCGGGG	Design primers
942940	CCGCCGGACAGCAGCACGCCGCCTCCGGACAGCACGACACCGCCTCCGGAGAGCAGCACACCG	Design primers
943018	CCTCCGCCGGACAGCAGCACGCCGCCCCCGGACAGCACGACGCCGCCTCCGGACAGCAGCACGCCTCCGCCCGGCAGCAGCACG	Design primers
1035769	CCGAGCCGACGCAGCCGAGCGGGCCGACGCAGCCGGCCGAGCCGCCCGAGCCGA	Design primers
1072958	CCGCTCCAGCTCCCGCTGCCACTCCCGCTCCCGCTC	Design primers
1077192	GACCAGGAGCAGGAACAGGAGCAGGAGCAG	Design primers
1084792	CTCCTCGTCCTCCTCGTACTCCGCGTC	Design primers
1085863	CGTTCCCGATCCCGTTCGCGGTCC	Design primers
1088488	CTTGCCGCC-CTTGCCGCC-CTTGCCGCC	Design primers
1119012	GGCGGCCTTCTTCCCGGCCTTCTTCGCGGCCTTCTT	Design primers
1127881	CGACGCCGCCGCGAAGCGGCTGGGGTCCGCCGCCGCGTAGCGGCTGGGGTCCGCCGCCGCGTAGCGGCTGGG	Design primers
1145880	GGGGCGGCGCGGTGCGGGCCGTGGC	Design primers
1151657	TGTGCCGTTGCGGGCTGAGCCGTCGTGGGCTGCGCCGTCGCGGGT	Design primers
1183879	GTCGAG-GTCGAG-GTCGGG-GTCAAG	Design primers
1202207	GCTGGTGCGAACCGCCTT-GCTGTTGTGGACCGCCTT-GCTGTTGCGGACCGGCTT-GCTGTTGCGGACCGGCTT-GCTGTTGCGGACCGGCTT	Design primers
1206520	CGGCAGCGGCGGTAGCGGAGGCAGCGG	Design primers
1289877	CGCTGGCCCTGGTGCTGGCACTGG	Design primers
1297828	GCCGCCCCCGCCGCCGCAGCAGCC	Design primers
1315588	CCGTCGCGGACCGCGTGTCCGTCGCGGATCTCGTTTCCGTCGCGGGCCGCGTTTCCGTCGCGGATCTCGTCT	Design primers
1340165	TGTGCTGCGATGAAGCCGCAAGGGTGCTGCGGTGAAGTCGCCAGGGTGCTGCGGTGAAGCCGCCAG	Design primers
1372537	ACCGGCGTAGCGGCGTAGCGGCGT	Design primers
1392918	GACCTCCGCCGGCCTGCGCCGCCGTCCGCC	Design primers
1410466	ATGTGGTCCCGGACTGACCGTGGTGGCGTGGTCCAGGACTGACCGTGCTGGCGTGATCCCGGATTGATCGTGGTG	Design primers
1425643	GCCGGCTCCGGCCGTTTCCGGCCCGCCCCG	Design primers
1432278	GCGGCCCCGGCCGCGGCGGCGACC	Design primers
1455207	GTCGTTGCTGAGCCTCCCGCCGCTGTCACTGCCGAGCCTGCCGCCGCTGTCACTGCCGAGCCTGCCGCCGCT	Design primers
1458990	GCCGAC-GCCGAC-GGCGAC-GCCGAG	Design primers
1463533	CGAGCCTGGTGCAGGAGTCGCCGAACCCGACGCAGGAGTCGCCGAGCCCGGTGCGCGAGTCAC	Design primers
1465107	GAGTCCGCGGGCTCCGATCTCGCGGGCTCCGAGTTCGCGAGCTCC	Design primers
1492170	TGTCGGGACGCGGGCCGGCGCCGTCCGGACGGGGGCCTGCGCTGTCGGGACGCGGGCCGGCCG	Design primers
1492648	CGCCG-CGCCG-CGCGG-CGCGG-CGCCC	Design primers
1494321	CCGCGGCGTCGCCCGCCGCGTCACCGGCGGCGTCGC	Design primers
1494459	CGAACGCGCCGCCGACCACGCCGCCGATGGCGCCGC	Design primers
1498465	GTGGCGGTGCTGGTGTCGGTGGTGGTGTCCGTGCTG	Design primers
1523796	TGCCGCCGGTGCCACCGGTGCCGCCGGTGCTGCCGGTGCCGCTGGTGCTGCCGG	Design primers
1529882	CGGTGGCGGCGGTGTCGGGGGTGGCGG	Design primers
1545507	GGTCCAGGTGCAGGACCAGGACCA	Design primers
1554301	GCGGCCGCCGCCGTCGCCGCCGCGGCCGCCGCGGCCGGGGCCGTG	Design primers
1556174	GAAGCCGGAGAAGCAGGAGAAGCCGCAGAAGCAGGAGAAGGCGGA	Design primers
1604994	CGGCCCGGGGCGCGCCGGGGCTGCCCTGGG	Design primers
1609945	GCCGAGGCCGTGGCCGGGGCCGAC	Design primers
1624805	CGGCCCGCCGCGGCCCGCGGCGCCGCGCCG	Design primers
1638528	GGTGGC-GGTGGC-GATGGC-GGTCGC	Design primers
1663324	GCCACCGCCAGCGCGACCGCCGCC	Design primers
1671946	GCCGATGCCGGTGCCGATGGCGATGCCGAG	Design primers
1688751	CGC-CGC-CTC-CGC-CGC-CTC-CGC-CGC	Design primers
1714859	GACGTCGTCGTCGATGTCGACCTC	Design primers
1717165	GGCTGAC-GGCCGAC-GGCCGAC-GGCCGAC	Design primers
1717194	ACCGGAG-AGCGGAG-AGCGGAG-AGCGGAG	Design primers
1726216	GCTCCAGCAGCTCCGGCAGCGCCAGCA	Design primers
1806221	GGCCGGAGCCTGCTGCTGAGCCGGTGCCTGCTGCTCGGCCGGGGCCGACTGCTG	Design primers
1806658	GCTGCTCGGGCTCCGGCTGCGCGGCCTCGGCCTGCTGGGGCTCGGGCTGCTGCGGCTCGG	Design primers
1812235	GGTCGCGGTCGGCGTCGCGGTGGC	Design primers
1816903	CGAGCACCAGCACGAGCGCGACCA	Design primers
1826958	GCGACCGCCACCGAGACCGCGATC	Design primers
1843469	CGGGCCAGTACGGCCAGC-AGGGCCAGTACGGCCAGC-AGTTCCAGTACGGCCAGC	Design primers
1855947	GAGCGCGAG-GAGCGCGAG-CAGCGCGAG	Design primers
1915587	CGGGGTGATTCCGAGGGCGGACCGGCGGAACTCCGAGGGCGGACCGGGGTGATTCCGAGGGCGGACCGGGGTGATTCCGAGGGCGGAC	Design primers
1915699	TCCGAGGAACGGAG-CCTGAGGAACGGAG-CCTGAGGAACGGAG-CCTGAGGAACGGAG	Design primers
1929428	GGCCGCCGCCGCGGCCGAGACCGC	Design primers
1984075	ACCGCGTCGACCGCGACGACCGCCTCG	Design primers
1996230	CGCGGCCGCGACCGCTGCGGCGGC	Design primers
2009350	GGATGGGGCGGTGTCGGTGTGTTGGGCTGGGCCGATGTCGGTGTGTGGGGCGGGGCCGGTGTCGGTGTGTTG	Design primers
2012142	GTGTGTCGGTGTGGCGGTGTGCCG	Design primers
2037128	CAGCAGCAGCAACGGCAGCAGGAG	Design primers
2067150	GGTCCTGGTGCTGGTGCTGTTCCT	Design primers
2087410	GAGCTCGGCAAGCTCGGCGTGCTCGGC	Design primers
2116498	GACGAGTCCGGTGAGCAGTCCGGTGAGCAGTCCGGT	Design primers
2142666	GTCTGCCCTGCGGCCGGTCTGCCCCGCCGTCGTCCTGCCCTGCGGCCC	Design primers
2166919	TTCCCGCGAACCCGGGCGCTCCCGCGACGCCGGGCGCGCCCGCGAACCCGGGCG	Design primers
2221609	GGCCGT-GCCCGT-GCCCGT-GGCCGT-GGCCGT	Design primers
2226078	GCCGACCTGATCCCCGCGACTCGCCGACCTGGTCCCTGCGACTCGCCGACCTGGTCACCGTGACGC	Design primers
2233823	GACCGCGACCACGACCGCGACCGG	Design primers
2331318	TGTGCTGCT-GGTGCTGCT-GGTGCTGCT	Design primers
2359138	GCGCCA-GCGCCA-GCGGCA-GCGCCC	Design primers
2361769	ACGTCGACGTCCGCGTCGACGACG	Design primers
2422862	CGTCCCAGGCCCGGCGCCGCCCACGTCCCAGGGGTGGCACCGCCCACGCCTCAGGGCCGGCGCCGCCCA	Design primers
2440090	GGGCATCGCGGGCACCGCGGGCATCGC	Design primers
2445351	GCCGATCCCCGGCCTGCCGCCGATTCCGGGCCTGCCGCCCATCCCCGGGTTGCC	Design primers
2445430	CCCGGCTTGCCGCCGATCCCTGGGCTGCCGCCGATCCCTGGGCTGCCGCCGATC	Design primers
2445676	CCGGTGACGCCACCTCCGGTCACCCCGCCTCCGGTGACGCCCCCGCCAGTGACACCTCCTCCCGTGACGCCTCCG	Design primers
2445800	CGGGCGGTACGGACAACGGCGGCACGGACAACGGCGGTACCGACA	Design primers
2454924	GCCGACGCCGCCGACGACGCCGAG	Design primers
2460998	CCGCGGCGGCAGCGGCGGCCGCGTCGG	Design primers
2478600	CGCGGTTGCGCGCGGTCGAGCACGGTCGCG	Design primers
2568524	CGGCCGGGCCCGGCTGGGCCCGGCG	Design primers
2588448	CGGCGGGTTCGGCGGCGGCGGGCTCGCGGGCGGCGAGTTCGCCGC	Design primers
2594143	GACCGGGGCCGGGAACGGTACCGG	Design primers
2660067	GTCGCGTTCGCGGTGGCGGTCGCG	Design primers
2805547	CGACGTCGACGCCGAGGTCCACGT	Design primers
2823800	GGTGGCTGGGGG-CTTGGCTGGGGG-CTTGGCTGGGGG	Design primers
2868291	CGGTGCGGAGGTGCGGCGGTCCGG	Design primers
2909367	AAGCGTGATGAAATGCGTGATGAAATGCGTGATGGA	Design primers
3087695	GATGCCGGTGCCGATGGCGGTGCC	Design primers
3091103	GCACGGGCACGCGCACCGCCACGG	Design primers
3114367	GCCGTGGTCCAGGCCGTTCTCCAGGGCGTGGTCCAG	Design primers
3117694	CGCGACCGCGGCCGCGAACGCGGC	Design primers
3166383	CGGCGACGGCGCTGGCGACGGCGG	Design primers
3177853	CGCCGACCTCGCCGGCCTCGCCGACGT	Design primers
3215963	CCGGAGCAGCCGGAGGAGCCCGAGCAG	Design primers
3220851	CGGTCGGCT-CGGTCGGCT-CGGGCGGCT	Design primers
3237756	CGGACCCGCGAGGAGGCGATCCGCGAGGAGGCGATCCGCGAGGAG	Design primers
3243592	GGGTCG-GCGTCG-GCGTCG-AGGTCG	Design primers
3270814	GATCGGCACCGGGATCGGCTGCGGGATCATCACCGG	Design primers
3281954	GGCGGCCGCCGGGCGGCCGCTGCGGGGCCGCCG	Design primers
3310403	CCGGTGCCGCCGTGGCCGAAGTTGCCGCCGTGGCCGCCGTTGCCGCCATGGCCG	Design primers
3310484	CCTTCGCCGCCG-CCGTGGCCGCCG-CCGTGGCCGCCG-CCGTTGCCGCCG	Design primers
3311582	GGCGGCGGC-AACGGCGGC-AACGGCGGC-AACGGCGGT-TCCGGCGGC-GACGGCGGC-GACGGCGGC-GACGGCGGC	Design primers
3311655	ACGGCATCGGCGGCG-ACGGCATCGGCGGCG-ACGGCCTCGGTGGCG	Design primers
3316890	TGCCGTTGC-CGCCGTTGC-CGCCGTTGC	Design primers
3339186	GCCGGGCTCTCCGGCGCCGGTCTCGCCGACGCCGAGCGCCCCGGC	Design primers
3353705	GCGCTGCCGCTGGCGTTGCCGCTG	Design primers
3374816	GCCGGCGCCCGCGCCGGTGCCGGT	Design primers
3381036	CCACGGCGACGGGCACGGCCACGG	Design primers
3381061	CATGGACACGGACATGGACATGGACATGGACATGGT	Design primers
3384043	GGACCCTGACCCGCACCCGGACTC	Design primers
3384984	CGGCGCGAAGCGCGCCGGCTCGGCGCCGACCGAGCCGGCTCGGCGCCGACCGAGCCGGCT	Design primers
3396550	GCGAGACGCAGGCCGGCGAGGCGCAGGTGGGCGAGGCGCCGGACG	Design primers
3402209	TCGCCGCCGCCGCCGCCGACGCCG	Design primers
3438060	CGCGGCGCTGGTCGCCGCCGGGGCGCTGGTCGCGGCCGCGTCGATGTTCGCCGC	Design primers
3465360	GCCGCCGCGGCCTCCGCCGCCGCG	Design primers
3494778	CTGCACCGGCACCTGCTCCTGGAC	Design primers
3518467	TCGGCGACGGCGTCGGCTTCAGCG	Design primers
3571134	GACGGA-GAGGGA-GAGGGA-GAGGGA	Design primers
3584288	TGACCGCCAGAACGCGGCTGACACCCAGAACGCGGCTGACGCCCGGAACGCGGC	Design primers
3617379	CGGCGCGGGTCGACTCGGGTCGGCGCGGAG	Design primers
3631823	AGACTCGGCGCGGGCGCGGACGCGGCGGGGGCGCGGACGCGGCGGGGGCGC	Design primers
3682874	GCTTGGCCG-GCTTGGCCG-CCTTGGCCG	Design primers
3746273	CCGACTTCGACTCCGAGTCCGACT	Design primers
3771986	GGGCTGGCGCGCGCTGGGGCTGGCCGGCGC	Design primers
3790808	CGGCGATGTCGGCGATCTCGGCGACGT	Design primers
3799408	CTGCGGGCGGCGGCGGGCGACTTCGAGCGG	Design primers
3806431	CGACGCCGTCGACGCCGACGACGACGT	Design primers
3813605	GCTCGCGGGGATTCCCGATCGCTCACGGGGATTCCAAGTCGCAGCGGGGGATTCCCGATC	Design primers
3880276	CGCCGCCGCTGCCGCCGCCGACGC	Design primers
3936041	CCCGC-CGCGC-CGCGC-CCTGC-CCCGC	Design primers
3954058	GTGGGGGTGGTGGTGTGGGTGGGG	Design primers
3956670	AGGCGCTGGCGCAGGTGCAGGCGC	Design primers
3985798	TGCGCAACCTGCGCGACCTGCGCACCC	Design primers
4011153	GCGGCGAGGCGGGGAGGCGGCGAT	Design primers
4110061	CAGCGCCCGCGCCAGAGCCCGCGCCAGCTC	Design primers
4129696	CGACCGCCACCGCCACCGCGGCCG	Design primers
4153099	CCCCGGTCACAACCGCCCGGTCACGACCGCCCGGTCACAACA	Design primers
4156762	CGGCGCGGTCGGCGCGCTCGGCGGGGT	Design primers
4161983	GCCTCGGCCGCGGCCACGTCCTCG	Design primers
4244692	GTCACC-GTCACC-GACACC-GTGACC	Design primers
4253242	GTCCTCGACGGGGTGCTCGACGGCGTCGTCGACGCG	Design primers
4265935	TCCCGACCG-GCCCGACCG-GCCCGACCG	Design primers
4305338	CCTCGG-CATCGG-CATCGG-CATCGG	Design primers
4339657	CCGCCGCCACCGTCGCCGCCCCCG	Design primers
4355082	CAGGTCCGGGTCCACGTCCAGCTC	Design primers
4369841	GCGGGCCCGGGCTCGGGCGCGGGG	Design primers
4440010	CGGCTACGTCGGCTACTTCGGCTACGA	Design primers
4468254	GGGCTGGCGCTGGGGCTGGGCCTG	Design primers
4500459	GGCGTCGGCGACGCCGTCGTCGTC	Design primers
4501548	TCAGCGTCACCGACAGCGTCAGCG	Design primers
4519496	GGCCGGGGCCGTGGGCGGCGCCGG	Design primers
4537817	ACGACGACGACATCGACGACGTCG	Design primers
4540571	CTGGCGCTGGAGCTGGTGCTGGCG	Design primers
4541406	CGTGCTGGTCCCGGTGTGATCGGGCTGGGCCTTGTGTGATCGGGCTGGGCCCGGTGTGGT	Design primers
4640568	CCTGAGCCGCACCGGCGCCGCACCGGCGCCGCA	Design primers
4675210	GCGCTCGGCGCGGTCGGCGAGCTCGGC	Design primers
4777641	GCGGCAGCGTCAGCAGCACCGGCA	Design primers
4846054	TCCACGGCGCCTTCCCGGGCGCCTTCCACCGCGCCG	Design primers
4925396	CGCGCGGCCTCCCGCGGACTCGCGGGGCCC	Design primers
4931492	CTGGTCCTGCTCCCGGTCCTGGCC	Design primers
4938093	CGGCGAGGGCGACGGCGACGTCGA	Design primers
4978000	GGTGCCCTGCTGGTCGGTGCCCTGCTCGTTGGCGTCCTGCTGATCGGCGCCCTGCTGATCGGCGCCCTGCTGGTC	Design primers
4978087	ATCGGCGCCCTGCTC-GTTGGCGTCCTGCTC-GTTGGCGTCCTGCTC-GTTGGCGTCCTGCTC	Design primers
5047221	CGGCGTTGGCGTGACGTTGGCGCAGCATTGGCG	Design primers
5048703	CCGCTCCGCCGCAGAGCGCCCAGCCGCAGAGCGTTCCGCCGCACAACGCCCCGCCTCAGA	Design primers
5053060	AGCGCCAGCTCCCGCGCCTGCGCC	Design primers
5092900	CGGCAC-CGGCAC-CGCCAC-CCGCAC	Design primers
5099269	CG-CG-TG-CG-CG-AG-CG-CG-AG-CG-CG-AG	Design primers
5128303	TGCCGTCCGGTTTTCCGGGGCTA-TGCCGTCCGGCCTTCCGTGGCGA-TGCCGTCCGGCCTTCCGTGGCGA-TGCCGTCCGGCCTTCCGTGGCGA	Design primers
5149590	GCCGTCGCGCGCCCGCGCGCACCGACGCGC	Design primers
5158336	CGACGTCTACGTCGTCGTCGACCT	Design primers
5219793	ACCGCCGCCGGTACCGCCGCCCGTACCACCGCCGTT	Design primers
5243103	GGGTTGGGGTCACGGCTGGGGCTGGGGCCACGGCTGGGGCTGGGGTCACGGCTG	Design primers
5301712	GTGGCGG-GCGGCGG-GCGGCGG-GCGGCGG	Design primers
5313559	CGTCGCCGTCGAGGTCGCCGACGC	Design primers
5454613	TCGGCCTCGCCCTCGTCCCCGGCC	Design primers
5531859	CATCGCGGT-CATCGCGGT-CATCGCAGT	Design primers
5615443	CTCGGCATCGGCCTCGACCTCGTC	Design primers
5670961	GCGAAGGTG-CCGAAGGTG-CCGAAGGTG	Design primers
5689615	CGGCGGGGCGCGCCGCAGCGCGACG	Design primers
5755833	CGCGCTGGCCGCGCTGACGGCGCTGGC	Design primers
5772337	GTC-ATC-GTC-GTC-GTC-CTC-GTC-GTC	Design primers
5778752	CGGACAGCCAGACAGCCGGACAGC	Design primers
5784957	GGTCACTGCTCTGACCCGGTCACTGCCCTGCTCCGGCCACTGCTCTGACCT	Design primers
5795262	GGCCAGCGCGGCCAGCACCGCCAGCGC	Design primers
5821160	GGCGGCCACCGGCGGCCTTCGGCGACGACC	Design primers
5855907	CGGCCGGGCCCGGGCCGGCGCGGCC	Design primers
5858440	CCGCCTCCGCGTCGGCCTGCGCCT	Design primers
5913491	TGCGACGGCGGCCCTGGCACGGCGGCCCTGGCACGGCGGCCC	Design primers
5918550	TTGCCCCGCACAAGCGGGCGGCTGCCCTGCGCGAGCGGGCGGCTGCCCCGCACAAGCGTGCGTGCGCCCCGCGCATGCGGGCGG	Design primers
5942557	GCTGCTGCTGGTGCTCCTGCTGCT	Design primers
5965574	CCGGTCGCGGTCACGGTCGCGGTC	Design primers
5965842	CCCGGCGGCGGACCTGGAGGCTGGCCGGGTGGCGGGCCTGCAGGCTGGCCGGGTGGCGGGCCTGGAGGCTGG	Design primers
5966243	ACCCTGCGGGTTCGGCCCCTGGGGGTTGGGGCCCTGGGGGTTGGG	Design primers
5974934	CCGCG-CCGCG-CGGCG-CAGCG-CCGAG	Design primers
5977681	CGGCAGCGGTCCGCGGGCT-GGGCGGCGTTCCGCGGGCT-GGGCGGCGTTCCGCGGGCT-GGGCGGCGTTCCGCGGGCT	Design primers
5984597	CGTCCGGCCGCCGGAGGCGG-ACGGCGGCCGCCGGAGGCGG-ACGGCGGCCGCCGGAGGCGG	Design primers
5984697	GCGGCGGCCGGGACGGCCGCGGCCGGGAGGGCGGAGGCCGGAGCG	Design primers
5985293	ACAGCGGTGGCCCCGGCGGCAGCGGCGGTGGTCCTGGCGGCAGCGGCGGTGGCCCCGGCAGCA	Design primers
5985460	CGGTGGCTCGCGATGGCTGGCGGTGGCGCG	Design primers
5987007	CCTGACAGCCTGAGCCGAACACCCTCGCCGCCTGAGCGGAACACCCTGGCCGCCTGAGCGGAACAC	Design primers
5988185	CGCCCAGGTGATCAGCACGCGCAGCGGCCCAGGTGAACAGCAGGCGCGGCGGCCCAAGTGAACAGCGGGCGCAGC	Design primers
5990638	GCGTCG-GCGTCG-ACGTCG-GCGACG	Design primers
6003239	AAGTCCCACGAGGGCAAGAAGTCCCACCACGACAAGAAGTCCCACCACGGCAAGAAGTCCCACGGGGACAAG	Design primers
6029331	GCGAGG-CCGAGG-GCGAGG-GCGAGG	Design primers
6057439	GCGGCGCGGTCGAGCGGG-GCGGGATGGTCGAGCGGG-GCGGGGTGGTCGAGTGGG-GCGGGGTGGTCGAGTGGG-GCGGGGTGGTCGAGTGGG	Design primers
6111403	GCTGGAGCGGGCTCGGGT-TCTGGAGCGGGCTCGGGT-TCTGGAGCAGGCTCCGGT	Design primers
6114596	TCGGCGTCGTCGTCGGCCTCGACG	Design primers
6135581	CCTCCGCAAGCTGCCGCTCGGCAAGCGGCCGCTCAGCAAGCTGCC	Design primers
6162683	CCTCCTTCCGCGCCACCTCCCGCGCCTCCTCCCGCG	Design primers
6170808	GACGGCGATGGCGACGTCGACGCC	Design primers
6171849	CCGATCGGTCCGGTCGGTCCGTTCGGT	Design primers
6185399	CCGCCACCCCCACCGCCCCCGCCT	Design primers
6193884	CCACCGCGACCAGCGCGACCACCACGA	Design primers
6248555	GGGCGGCAGGTGTCGGCGGAGCGGGCGGCTGGCCTCGGCGGAGCGGGCAGCTGGTGTGGACGGAGCGCGCGGCAGGTGTCGGCGGAGCGGGCGGCTGGCCTCGGCGGAGCAGGCGGCAGGTGTCGGCGGAGCGGGCGGCCGGCCTCGGCGGAGCAGGCGGCAGGTGTCGGCGGAGC	Design primers
6262361	GGTGTGCCGGTCAGGTCGCGTGCCGGGCAGGTCGCGTGCCGGGCAGGTCGCGTGCCGGGCAGGTCGCGTGCCGGTCGGGT	Design primers
6271508	CGGCGTCGACGTCGGCGCCGGTGT	Design primers
6281869	GAAGGCGGAGAAGGCCAAGCCTGAGAAGGCCAAGCCGGAGAAGGC	Design primers
6284648	GCGGCTTGGCCAGGTCCCCGGCCG-ACGGCTTGGCCAGGTCCCCGGCCG-ACGGCTTGGCCGGGTCAGCGGCCG	Design primers
6284768	CCGCCGTGGCCCTCCCCGCCGTGGCCCTCGCCACCGTGCGCCTCC	Design primers
6303812	GCCGCCGTCGCCGCCGACACCGCC	Design primers
6339133	GCGCGGCCCTGCGCGCGTAGGGCCGCCCTGCGGGCGTAGCGCGGCCCTGCGGGCGTAGCGCGGCCCTGCGGGCTTG	Design primers
6403078	CGCGGCGCGAGGCGGCGCTGCGCCG	Design primers
6430085	CCCCGAAACCCCCGAGACCCCCGAAAC	Design primers
6430390	CTCCGGCTCCCG-CGGCGGCTCCCG-CGGCGGCTCCCG-CGGCGGCTCCCG	Design primers
6439405	ACCCCGACACCGACACCGACCACG	Design primers
6467097	GGCCGCCGGCCGTCGTCAGCTCCCCGGCGGCCGTCGTCAGCTCTCCAGCGGCCGTCGTCAGCT	Design primers
6507375	CGCGGCTCGGCGCGGCTCGGCTCGG	Design primers
6507401	GGCGCGGAGCCGGTTCCGGCGGCGCGGAGCGGGTTCCGGCGGCGCGGGGTGGGTTCCGGC	Design primers
6525571	CGCCTGGGCCTGCGCCTCCGGCTG	Design primers
6561714	GCGCGGCGCCGGGCGGCTCGGCGTG	Design primers
6563698	GTAGTGCGCCCCTACTGCGCAGTGCGGCCCTACGGCTTGGTGCGCCCCTACTGC	Design primers
6600255	GTTCTGCCCGCCGGTCACCTGCTGCTGCTGCCCGCCGGTCACCTGCTGCTGCTGGCCGCCGGTGACCTGCTG	Design primers
6653011	GCACCGGTACCGGCACCGGCACCG	Design primers
6653078	GACCGCCGCCGCCACCGCCGCCGGGACGGCCACCGC	Design primers
6653535	GGGGCCGGGCTTGGGACCCGGCTTCGGGCCGGGCTT	Design primers
6653592	GGACCGCTCGGAGCGCGGCTGCTCGGAGCGCGGCTGCTCGGAGCG	Design primers
6653742	CTTGGGACCCGGCTTCGGTCCCGGCTTGGGACCGGG	Design primers
6683916	CTCGACCACGACCTCGGCCTGGAC	Design primers
6692355	GGCGACGGGCTCGGCAGT-ACCGGCGGGCTCGGCAGT-ACCGGCGGGCTCGGCAGT-ACCGGCGGGCTCGGCAGT	Design primers
6697129	GCCGTCCGGGCCGTCGCCGTCAGGACCGTTCCCGTCGGGGCCGCC	Design primers
6701190	CCGCCTCGCCCCGCGCCGCCCCGAC	Design primers
6714608	CGGGGACCTGGCGGCGGCCAGCGGTCGGAGACCGGGCGGCGGCCAGCGGCCGGAGACCGGACGGCGCCCTGCGGT	Design primers
6716855	CCGCGACGGCGACCCCGACCGCGC	Design primers
6752386	CAGCCGCAGCAGCAGCCGCTGCCG	Design primers
6761712	GAGGACACGAGGACCCGAGGAGAC	Design primers
6775280	CCAAGGCCA-CCAGGGCCA-CCAGGGCCA-CCAAGGCCA	Design primers
6779431	TGACCACGGTGACCAAGGTGACCACGG	Design primers
6792025	GCCGCCGCTGCCGCCGCTGCCGGC	Design primers
6792130	CTTGCCCTT-CTTGCCCTT-CTTCCCCTT-CTTGCCCTT	Design primers
6794090	GGGCTC-GGGCTC-GGGTTC-GCGCTC	Design primers
6853238	CGGTGTCGGCGTCGGGGTCGGCGT	Design primers
6908263	CGC-CGG-AGG-CGG-CCG-AGC-CGC-AGG-CGG-ACG-CGG-CGG-AGG-CGG-AGG	Design primers
6913436	GGCAACGCGGGCAACCCGGCCAACGCG	Design primers
6926563	CCGGCCTCCCCGGCCTCGCCGGACTCC	Design primers
6935652	AGCGCGGAGCGGCGCGGACCAGCGCGTCGC	Design primers
6957345	CGGGCCGCGCCCGGCTCAGCTCGCGGACGTGCCCGGCTCAGCTCGCGGCCGCGCCCGGCTCAGCTA	Design primers
6965697	AAGCCGCGAAACACCCGCGGAAAGCCGCGCAATACCGGCAGAAAGCCGCGAAACACCAGCCGC	Design primers
6998950	GCGACCGCGCCCGCCACCGCGCCCTCGACC	Design primers
7007669	GCAGGCGCTGGTTCGGCGGACGCTGGTTCAGCAGACGCCGGCTCG	Design primers
7030809	CCGGCCGGGCCCGGACCGGGCCCGC	Design primers
7046072	GCGGTCCTGGCGCTCACCGCGGTCCTGGCGGTCTCCGCGGTCCTGCCGGTCTCCGCGGTCCTGCCGGTCTCCGCGGTCCTGCCGGTCTCCGCGGTCCTGGCGCTCACC	Design primers
7053251	GACGTCGAAGTCGACGCCGAAGTC	Design primers
7055778	CGGACACGGCGGCGGACACGCGGGTGGACACGGCGG	Design primers
7093258	GCGAGGCGCGGCGGGCCGCGGCGCTGCGCG	Design primers
7121028	CCGAACCCGCACCTGAACCCGAGC	Design primers
7130179	GACGCCGACGCGGATGCCGATGCC	Design primers
7134225	CCGTGGCCGTGCCCGAGGCCGTCG	Design primers
7139598	CCGGGCCAACCCGGGCTGACCCGGGTCAGC	Design primers
7148833	GAGGTGGGCGAGGTCGGCGAGGTGGCC	Design primers
7170907	CACGCTCAACGCGACGACCGGACTCAGGCTCATGGCAACGACCGGACTCGCGCTCACCGCGACGACCGGACT	Design primers
7186192	CGGCGCGGGGCGGCACCGCGCGGCG	Design primers
7199455	AGCAGCAGGAGCTGCAGCAGCATC	Design primers
7220997	GCTCGGGCGCGGGCTCCGGCTCGG	Design primers
7223938	CTCCTCCTGCTCCTCCTGCTCTTC	Design primers
7239205	GAGGTGCCGGTGCGG-GCAGTGCGGGTGCGG-GCAGTGCGGGTGCGG-GCAGTGCGGGTGCGG-GCAGTGCGGGTGCGG	Design primers
7239687	ATCGGCACCAGCGGCACCATCGGCGCC	Design primers
7247310	CGACGTCGTCGTCGACGCCAACGT	Design primers
7261548	GGGGTGGGCTTCGCT-GGAGTGGGCTTCGCT-TGGGCGGGCATCGCT-TGGGCGGGCATCGCT-TGGGCGGGCATCGCT	Design primers
7269688	GCGTCGGCGACGGCCTCGGCGTCG	Design primers
7286305	GCT-GCT-GCT-GTT-GCT-GCT-GTT-GCT	Design primers
7286751	CCCTGCCCATCGGCCGCCTGACCAACCCCATCGGCAGCCTGACCCAGCCCGTCGGCGGCCTGA	Design primers
7313647	AGCCGCCGTGGCCGAAGTCGCCGCCGTGGCCGCCGTGGCCGCCGTGGCCGAACG	Design primers
7313736	CCGTTGCCGCCACCCTGGCCGCCACCGTTGCCGCCG	Design primers
7320692	TCGGTCCCTGATCCGGCCGGTCCCTGACCCGGTCGGCTCCTGAGCCGG	Design primers
7325644	CGCGG-AGCGG-GGCGG-CGCGG-CGCGG	Design primers
7325699	GCGGGGCGGGAGCGGGAGCGGCGCGGGAGCGGCGCGGGAGCGGCGCGGGAGCGGAGCGGGAGCGGA	Design primers
7325766	CGGGAGCGGAGCGGGAACGGAGCGGGAACGGAGCGGGAACGGAGCGGGAACGGAGCGGGAACGGAGCGGGAACGGAGCGGGAACGGAGCGGGAGCGGGA	Design primers
7325885	GGAGCG-GGAGCG-GGAGCG-GGAGCG	Design primers
7325912	CGGAGC-GGGAGC-GGGAGC-GGGAGC	Design primers
7326683	GACCCGCCAGCCCTGCCACGCCAGCCCTGCCACGCCAGCCCT	Design primers
7326802	AGGTGGAGCGCACCGGTAGACGGAGTGCACCGGTAGGCGGAGTGCACCGGT	Design primers
7340302	CC-GA-GC-GC-GA-GC-CC-GC-GC-CC-GC-GC	Design primers
7356298	TGGCGGGGGCGGTAGCGGCGGCGG	Design primers
7409196	GCCGAGGCCAAGGCCGCGGCGGAGTCCGAG	Design primers
7411025	GGGGTCGAGGTCGCGGTCGAGGTC	Design primers
7445969	CCG-CCG-CCG-CGG-CGG-CCG-CGG-CCG	Design primers
7453738	GGGTGACGGACGACGT-CGATGGCGGACGACGT-CGATGGCGGACGACGT-CGATGGCGGACGACGT	Design primers
7453811	GCGGCGGAGGCCGCTGGCGGCGGAGGCCGTCGGTGGCGGAGGCCGTCG	Design primers
7467002	TGCGGCTGGCCCGGCTGCGGCTTGCCCGGGTGGGACTGGCCCTGC	Design primers
7481608	CGTCGGCGTCCGCCTCGGAGTCGGCGTCGG	Design primers
7483455	TCTGGGCCACGGCGGGCGGGGTCACGGCGGGCGGGGTCACGGCGG	Design primers
7528670	CGGCGACGGCAACGACGACGGCAA	Design primers
7556330	CGACGGAAACGGGAGCGGGGACGGAAACGAGGGCGGGGACAGAAACGGGGGCGG	Design primers
7566784	CAGGCGCAGCCGCAGGGGCAGGCC	Design primers
7578744	CCGCCCATGCCACCCATGCCGCCCATC	Design primers
7583383	CTCGGC-CTCGGC-CTCCGC-CACGGC	Design primers
7590973	CGG-CGG-CGG-GGG-CGG-AGG-CGG-TGG	Design primers
7599285	AGC-ATC-ATC-ATC-GGC-ATC-ATC-ATC-ATC-ATC	Design primers
7618931	ATCACGATGACGATGACGATCAGG	Design primers
7641529	CGGTTCATCCACGCGCAGCTCATCCACGCGCGGTTCGTCCGCGAGCGGTTCATCCGCGCG	Design primers
7641608	TCATCCGCGAGCGGTTCATCCGCGCGCAGCTCATCGGCACGCGGTTCATCCGCGAGCGAC	Design primers
7644877	GTGGCT-GCGGCT-GCGGCT-GCGGCT	Design primers
7652004	GGGCGCGGGGCATCGGGGCGGGGGCCGTCGAGGCGGGGGGCATCA	Design primers
7671784	GCATCGTCGGACGCGGCGTCGTCGGGCTCGACATCGTCGGGCTCG	Design primers
7675059	GAGCGG-CAGCGG-CAGCGG-CAGCGG	Design primers
7682945	CGGCGGCGGCCGGGGCGGCGGCGG	Design primers
7696224	CGTGAAGGTCACCACTGAGAAGGTCACCACTGAGAAGGTCACCGC	Design primers
7708977	TTGCCG-TTGCCG-TTCCCG-CTGCCG-TTGCCG	Design primers
7716882	CCCAGGCCAGCCCGGCCGAGCGCAG	Design primers
7737825	CCGACCTGCGCGGCGCGGACCTGCGCGGCTCCGACCTGATCGGGGCCGACTTCCGCGACGCCGACCTGCGGGGCG	Design primers
7739078	GACCGGAGG-AACCGGAGG-AACCGGAGG-AACCGGAGG	Design primers
7759406	GCCCGGACGACGCGGCAGCGTCGCGGCGGACGCGGCAGCGTCGCGGCGGACGCGGCAGCG	Design primers
7782097	TCGTCGTCGTCGGCGTCGTCCTCG	Design primers
7784620	GGCGCAGCCGGAGCGGACGCAGTCGGCGCGGACGCAGCCGGGGCG	Design primers
7807429	CCCTGCTCCCCCGACGCCGAAGCCTGCTGCCCCGATCCCGAAGCCTGCTGTCCCGACGCCAAA	Design primers
7838757	TTGGGACGG-CTGGGACGG-CTGGGACGG	Design primers
7848735	CGAGCTCGGCGTCGAGGTCGGCGACGAGCTTGCCGT	Design primers
7887524	CGGACCCGTGAGGACGGCCCCGTGGGGACGGCCCCGTGGGGA	Design primers
7896919	CCTTCCGCACCTCCCGGGCCTTCCGGATCTTCCGGGCCTTCCGCACCTCCGGCG	Design primers
7897350	CGACGACGATGACGAGGACGACGACAACGA	Design primers
7936446	GACCCCCGTCAATGCCCAGGTGCACGCGCCGTCAATGCCCAGGTGCACGCGCCGTCAATGCCCAGGTGC	Design primers
7963645	CGGGCGGCTCCGCGCGGGTCCGGGTCGCTC	Design primers
7975084	GCCGCGCGCCCGCGCGGCCGGGCG	Design primers
7976074	CTCCTGCTCCTCCGCCTGCTCCTG	Design primers
8008165	GAGGTGCGGGCCGCTCAGGCGTGGGCCGCTCGGGTGCGGGCGGCTCGGGTGCGGGCGGCTGTGGCGTGGGCCGCT	Design primers
8010981	CGCACAGGGCCGGTCGGGGGACGAGGTGGGCCGGTCGGGGGACGCAAGCGGCCGGTCGGGGGT	Design primers
8015602	CGG-CGG-CGC-CGG-CGC-CGG-CGT-CGG	Design primers
8052086	CGCCG-CGCTG-CCGCG-CCGCC-CCGC	Design primers
8054927	GCGAGCACCGCGAGCACGGCCAGCACC	Design primers
8103253	GCCGCGGCTCCGGCCGCCGCCCCGGCGGCGGCACCG	Design primers
8163461	AGACGTCGGCGGGGCCGAGGTCGTCGGCGGCGCCGAGGTGGTCGGCGGGGCCGA	Design primers
8165757	GCGGCACCGGCGGCACCTGCCGCACCG	Design primers
8173927	CCGGACCCGTCGACCAACGCGGACCCGTCGACCAGACCGGACCGGGCGACCAGC	Design primers
8175650	CGTCGTGACGGCGG-AGTCGTGACGGCGG-AGTCGTGACGCCGG	Design primers
8179509	CGTCGGCGCCGGAGTCGGCGGCGG	Design primers
8209927	ACGTCGAGGTCGATGTCGCCGTCG	Design primers
8210824	ACCGGCACCTGCACCAGCATCGGC	Design primers
Search your sequence for microsatellites

This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.

Info

Percentaje of mismatches allowed within the tandem repeats: 0 | 0.1 | 0.2

Position

Sequence

116633

CCGACCCGACCGGCACGCGACCTGCCCGGCACGCGACCTGCCCGGCAC