Microsatellites /Tandem Repeats database

Genome: Corynebacterium glutamicum R

Search your sequence for microsatellites
This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Info
Percentaje of mismatches allowed within the tandem repeats: 0 | 0.1 | 0.2
 
PositionSequence 
54157CAGCCTCAGCCACAACCTCAGGCTCATCCTDesign primers
60938CAGACCCAGATCCAGACCCTGACCDesign primers
219512CGCTAGAAC-CGCTAGAAC-CTCTAGAACDesign primers
224657CGACGCCGGCGCCGACCCCTACGCDesign primers
229729ATCGGAAGCGAATCGGAAGTTAATCGGACTCGADesign primers
402617GGCGCACCCC-AGCGCACCCC-AGCGCACCACDesign primers
402649GCGCACCCCA-GCGCACCCCA-GCGCGCACCADesign primers
428035ACCGCAGGCACCACAGGCACCGCAGGADesign primers
430921AAGAAGACCACGGCTAAAAAGACAACAGCTAAGAAAACCACTGCTDesign primers
460495CAGAAGCCC-CAGAAGCCC-CAGAAACCCDesign primers
465293CAGCCTAAACGC-CAACCTAGACGC-CAACCTAGACGC-CAACCTAGACGCDesign primers
466003CAAAGAACCACCAAGGATCCACCAAACATCCACDesign primers
521415AGATCCTGGGACCCCAGTAGAGCCTGAGACCCCAGTGGACCCTGAGACCCCAGTAGATCCTGAGACCCCTGTDesign primers
522527CCCCATAA-ACCCATAA-ACCCATAADesign primers
598668TGGCCTGCCGGTCAG-GCACCTGCCGGTCAG-GCACCTGCCGGTCAG-GCACCTGCCGGTCAG-GCACCTGCCGGTCAG-GCACCTGCCGGTCAGDesign primers
603401CGAAGCCGA-CGAAGCCGA-CTAAGCCGADesign primers
637913GCAGAAGCAGACGTAGAAGCAGATDesign primers
686641TTCGAGATTCTG-GGCGAGATTCTG-GGCGAGATTCTG-GGCGAGATTCTGDesign primers
725431TTGGGAAGT-CTGGGAAGT-CTGGGAAGTDesign primers
759617GAAATGATGCCGAAATAAGGCCGGAATGATGCCDesign primers
837192TGGTGCGGCTGGTGCGCCTGGTGCGGTDesign primers
917186GCCCTTATCGAACCCTTATAGAACCCTTATTGADesign primers
1327657GATGACGAGGACGATGAGGATGATDesign primers
1336394GATAAAGCCTAAGGAAAAGGCCTAAGGAAAAGGCCTAAGDesign primers
1395261CTTTTCAGAAGACTGTTCAGAAGACTTCCCAGAAGADesign primers
1715692TGCTGCTGCTGAGGCTGCTGCTGTDesign primers
1766933GCTTGCGCTGCCTGAGCTTGCGCGGCTTGTGCTTGTGCTGTCTCADesign primers
1811015AGCTCTAACAAGAAGCTTTAACTAGAAGCTCTAACGAAADesign primers
1965112GCTTGTTAAAAGCTCGTTAGAAGCTTGTTAAAADesign primers
2001919TTTAGCCCGATCTAGCCCGATCTAGCCAGADesign primers
2014893GAGCCACCCTGTGGGCGTGAACCGCCCTGAGGGCGTGGTCCACCCTGTGGGCGTDesign primers
2014991CTGACCATCACGCTGTCCGTCACGCTGACCATCTCGDesign primers
2068466TGCGGGATGAACGCGGGATAAATGCGGGATAAADesign primers
2068500CCCACAAAAC-CCCACAAAAC-CCCACAAAACDesign primers
2187302AAGATT-CAGATT-CAGATT-CAGATTDesign primers
2190630ACTGAGCCTGACACCGAGCCTGACACTGAATCTGACDesign primers
2303875GCAGCTGCAGCACCTGCCGAAGAGGAAGCAGCACCTGCCGAAGAGGAAGCAGCACCTGCCGAADesign primers
2391721GTCACGTCTTTAGTCACGTTTTTGGTCAGATCTTTADesign primers
2403390ATGGGCATC-ATGGGCATC-ATCGGCATCDesign primers
2641807GTGGGATTGCTCGAGGTGGAATCGCTGGAGGTGGGATTGCTGGAGDesign primers
2646033GGCTGGGGT-TGCTGGGGT-TGCTGGGGTDesign primers
2653924CGCCACCGCAACCGCTACCGCCACDesign primers
2761730GCGTTCACCGCTGGTTTCACTACCGGATTCACCGCTGGTTTCACTACCGGTTTCACCGCTGGTTTCACCGCCDesign primers
2796953AAGAAGACCACTAAGAAAACTACTAAAAAGACCACCDesign primers
2830277AGCCAGCCCC-CGCCAGCCCC-CGCCAGCTCCDesign primers
2884076CTACAAAGCCCCAGAAAGCCCCAGAAAGCCDesign primers
2922482AAATCCGACTAAGTCCGACTAATTACGACTDesign primers
3044742TCTGGGGAT-TCCGGGGAT-TCCGGGGAT-TCCGGGGATDesign primers
3120347TCT-TCT-GCT-TCT-CCT-GCT-TCT-CCT-GCTDesign primers
3276349TAGTGGTTT-CAGTGGTTT-CAGTGGTTTDesign primers
3297604CAAAACAGCCAAAACAACCAGAACAGCDesign primers

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