Microsatellites /Tandem Repeats database

Genome: Synechococcus sp. RCC307

Search your sequence for microsatellites

This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Info

Percentaje of mismatches allowed within the tandem repeats: 0 | 0.1 | 0.2
 
PositionSequence 
17114TGGCGGCGGCGGTGGTGGTCGCGGDesign primers
17139GGTTATGGCGGCGGTGGCGGC-GGCTACGGCGGCGGTGGTGGC-GGCTACGGCGGCGGTGGTGGC-GGCTACGGCGGCGGTGGTGGC-GGCTACGGCGGCGGTGGTGGCDesign primers
290927CTGCAGCTCCAGCTGCGGCCGCAGDesign primers
333848CTGCTGCTGCTTGTGCTGGTGCTGDesign primers
342272GCAGCCGCTGCCGCTGCCGCAGGCDesign primers
590899GGCATCGCCATCGGCATCTGCATCDesign primers
644166GCGGCGGAGGCGGCAGCGGCGGCADesign primers
752913TTTTTGGTGTTTTGGTTTGTTGGTDesign primers
806440GAAAGCCAAGGCTGCTCCCAAAGCCAAGGCAGCCCCTAAGGCCAAGGCTGCTCCCAAAGCCAAGGCAGCCCCTAAGGCCAAGGCTGCTCCDesign primers
820163GCACCAGAGCCCGCACCAGAGCCAGCTGCAGAGCCCDesign primers
916745CGTCGTCATCGTCGTCATCGTCGGDesign primers
1100472GGTGGTGGTGATCGTGGTGGTGGTDesign primers
1113789ACTGCTTT-CCTGCTTT-CCTGCTTTDesign primers
1171206GCAACAGCACCAGCATCAACAACADesign primers
1205027CCG-GCG-GCG-GCG-GCG-GCG-GCG-GCGDesign primers
1215698TGC-AAC-TGC-TGC-AAT-TGC-TGC-AGC-TGCDesign primers
1227245AGC-GGC-AGC-AGC-AGC-TGC-AGC-AGCDesign primers
1283737CGCCACTGCCGCCACTACCGCGACTGCDesign primers
1294317GGCAGCAGCGCCAGCAGCGGCAACAGCDesign primers
1351057CTGCCCTGGCCTGCATTGCCCTGGCDesign primers
1393421GCAGCAGCAACAGCAGCTGGAGCADesign primers
1411522CCA-CCA-CCA-CCA-CCA-GCA-ACA-CCADesign primers
1458370CAC-CAC-CAC-CAT-CAG-CAC-CAA-CACDesign primers
1465602GCCAGCGACGGCCAGCGGCCGCCACCGGCGDesign primers
1494824AGC-TGC-TGC-TGC-TGC-TGC-TGC-TGCDesign primers
1508808GGTGTCGGTGTTGGGGTCGGTGTTDesign primers
1560223GCTGGTGCTGGGGCCGGTGCTGCTDesign primers
1850383CACCGCCTGCCCCGCCTGCCCCGCCTGDesign primers
1864133CCCGGA-ACCGGA-ACCGGA-GCCGGA-GCCGGA-GCCGGADesign primers
1961090CGG-CAG-CGG-CGG-CAG-CAG-CGG-CGGDesign primers
2061562GACCTC-TACCTC-CACCTC-CACCTC-CACCTCDesign primers

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