Microsatellites /Tandem Repeats database

Genome: Citrobacter koseri ATCC BAA-895

Search your sequence for microsatellites
This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Info
Percentaje of mismatches allowed within the tandem repeats: 0 | 0.1 | 0.2
 
PositionSequence 
629196GGCAGCG-GTCAGCG-GTCAGCG-GTCAGCGDesign primers
819086AATGGTAT-CTGTGTAT-CTGTGTAT-CTGTGTAT-CTGTGTAT-CTGTGTAT-CTGTGTAT-CTGTGTAT-CTGTGTATDesign primers
934634ATATAAAAATAACTATAAATATCADesign primers
1043342CAGCATCAGCGTCAGCATCAGCACDesign primers
1298033GAAGCCGAAACCTAAGCCGAAGCCDesign primers
1474495GCCAGCGCCATCGTCAGCACCAGCDesign primers
1765128CACCAT-CCTGCT-CCTGCT-CCTGCT-CCTGCT-CCTGCT-CCTGCT-CCTGCT-CCTGCT-CCTGCT-CCTGCT-CCTGCTDesign primers
2156733GCCCTG-TCCCTG-ACCCTG-ACCCTGDesign primers
2317076GCGCTGGCGATGGGGCTGACGCTGDesign primers
2324373GCTGGC-GCTGGC-GCAGGC-GCTGGADesign primers
2509454ACCAGCACCCGCGCCAGCGCCAGCDesign primers
2605289CGCGATCACCGCAATCACCGCGATCCCDesign primers
3221133AAATTATATTAAATGAGATTAAATTDesign primers
3275191GGCAAACA-GCTAAGAA-GCTAAGAA-GCTAAGAA-GCTAAGAA-GCTAAGAA-GCTAAGAA-GCTAAGAA-GCTAAGAADesign primers
3280944TTATTG-GCTCTG-GCTCTG-GCTCTG-GCTCTG-GCTCTG-GCTCTG-GCTCTG-GCTCTG-GCTCTG-GCTCTG-GCTCTG-GCTCTG-GCTCTG-GCTCTG-GCTCTG-GCTCTG-GCTCTG-GCTCTG-GCTCTG-GCTCTG-GCTCTG-GCTCTG-GCTCTG-GCTCTG-GCTCTG-GCTCTG-GCTCTG-GCTCTG-GCTCTG-GCTCTG-GCTCTG-GCTCTG-GCTCTG-GCTCTG-GCTCTG-GCTCTG-GCTCTG-GCTCTG-GCTCTGDesign primers
3444849TCGCTGGCACTGGCTGGCAATCACTGGAACDesign primers
3611766ATGGGGGAGGAGGCGGGAGGATGAGGGAGCDesign primers
3683388CCACCC-TGCTCC-TGCTCC-TGCTCC-TGCTCC-TGCTCC-TGCTCC-TGCTCC-TGCTCC-TGCTCC-TGCTCC-TGCTCCDesign primers
3717388TCGCCG-TCGCCG-TGGCCG-CCGCCGDesign primers
3877725GTTGTGATGTTGTGTTGTTGTGTTDesign primers
3927585CACCACCATCACGACCACGACCACDesign primers
3973071CATCATGCCATGATGCCAGCATGCDesign primers
4090163CACCGGGCAA-TTCCGGGCAA-TTCCGGGCAADesign primers
4234967TCGCCGCCA-TCGCCGCCA-TCACCGCCADesign primers
4583545CACCAG-CACCAG-CGCCAG-CAGCAGDesign primers

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