Microsatellites /Tandem Repeats database

Genome: Burkholderia multivorans ATCC 17616 Tohoku

Search your sequence for microsatellites
This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Info
Percentaje of mismatches allowed within the tandem repeats: 0 | 0.1 | 0.2
 
PositionSequence 
248403CGCGCGGCACCACGCGGCACCACGCGGCACDesign primers
248441CGCGCGAA-CGCGCGAA-CGCGCGAA-CGCGCGAADesign primers
275487GGAGCGGAC-GAAGCGGAC-GAAGCGGAC-GAAGCGGAC-GAAGCGGAC-GAAGCGGAC-GAAGCGGAC-GAAGCGGACDesign primers
275569GAGCGGAC-GAGCGGAC-GAGCGGAC-GAGCGGAC-GAGCGGACDesign primers
275610AGCGGACA-AGCGGACA-AGCGGACA-AGCGGACA-AGCGGACA-AGCGGACA-AGCGGACA-AGCGGACA-AGCGGACA-AGCGGACADesign primers
275691GCGGACGA-GCGGACGA-GCGGACGADesign primers
626733GGCGCGCGGCCAGCGGTGCGCGGCCAGCGGCGCGCGGCGAGCDesign primers
728195CCCGCG-CCCGCG-CCCGCG-CCCGCGDesign primers
818244ATGATC-GTGATC-GTGATC-GTGATC-GTGATC-GTGATCDesign primers
818281TGCGAG-TGCGAG-TGCGAG-TGCGAGDesign primers
941849CGCCGG-CGCCGG-CGCCGG-CGCCGGDesign primers
1220499GCGGCGAGGCGATGCGGCGAGGCGGTGCGGCGAGGCGGTDesign primers
1244130AAGAAACGG-AAGAAACGG-AAGAAACGG-AAGAAACGGDesign primers
1272186GGCGCG-GGCGCG-GGCGCG-GGCGCGDesign primers
1403266GCGCGAACG-GCGCGAACG-GCGCGAACGDesign primers
1433135GGCCGCCGGGTCGCCGGCCGCCGGATCGCCGGCCGCCGGATCGCCDesign primers
1503840TCACGTGCGGCG-TCCCATGCGGCG-TCCCATGCGGCG-TCCCATGCGGCG-TCCCGTGCGGCG-TCCCCTGCGGCG-TCCCGTGCGGCG-TCCCGTGCGGCG-TCCCGTGCGGCG-TCCCGTGCGGCGDesign primers
1503961CCCATGCGGCGT-CCCATGCGGCGT-CCCCTGCGGCGT-CCCGTGCGGCGT-CCCCTGCGGCGT-CCCGTGCGGCGT-CCCGTGCGGCGTDesign primers
1504057CCCATGCGGCGT-CCCATGCGGCGT-CCCGTGCGGCGTDesign primers
1504094CCGTGCGGCGGCCCATGCGGCGGCCCGTGCGGCGTCCCGTGCGGCGGCDesign primers
1510075CCAGACT-CCAGACT-CCAGACT-CCAGACTDesign primers
1983159CCGAGCCCGAAGT-CCCAGCCCGAAGT-CCCAGCCCGAAGT-CCCAGCCCGAAGT-CCGAGCCCGAAGTDesign primers
1991332ATCAAGCCGCCCGTCAAGCCGCCCATCGAGCCGCCCDesign primers
2085016GCGACGAT-GCGACGAT-GCGACGATDesign primers
2161594CAGCGCCGGTTCAGCGCCACTTCAGCGCCACTTCAGCGCCACTTCAGCGCCGGTTCAGCGCCAATTDesign primers
2294690CGCCCTGCGC-CGCCCTGCGC-GGCCCTGCGCDesign primers
2329485GGTGATC-GGTGAGC-GGTGAGC-GGTGAGC-GGTGAGC-GGTGAGCDesign primers
2575873GCGTCGATGCGCCGGGCGTCGATACGCCGGGCGTCGATACGCCGGDesign primers
2576835CGCACGTTGCACGCCGCCCGTTGCACGCCGCCCGTTGCACGCDesign primers
2599532TCGCC-GTGCC-GTGCC-GTGCC-GTGCC-GTGCC-GTGCC-GTGCC-GTGCC-GTGCC-GTGCC-GTGCCDesign primers
2599593GGCCG-GGCCG-GGCCG-GGCCG-GGCCG-GGCCG-GGCCGDesign primers
2599629GCGGAGCTGA-GCCGAGCTGA-GCCGAGCTGA-GCCGAGCTGA-GCCGAGCTGADesign primers
2727360GCCGAATC-GCCGAATC-GCCGAATCDesign primers
2765970CGTGCGGT-CGTGCGGT-CGTGCGGTDesign primers
2773386GGTCTCGGTTTC-GGTCTCCGTTTC-GGTCTCGGTTTC-GGTCTCGGTTTC-GGTCTCGGTCTC-GGTCTCGGTCTC-GGTCTCGGTTTCDesign primers
2857874GCCGGCCGCACCTCGCCGGCCACACCTCGCCGGCCGCACCGCDesign primers
2937464TGCCGGCCGCCGGAA-CGCCGGCCGCCGGAA-CGCCGGCCGCCGGAADesign primers
3079598GCACCGATTCGAGCGCCGATTCGAGCGCCGATTCGADesign primers
3093417CGCGGCACCGGCCGCCGCGGCATCGGCCGCCGCGGCATCGGCCGCDesign primers
3103469CCGCTGCCCGCCCGCTGCTCGCCCGCTGTCCGCDesign primers
3347721TTCCAG-CTCCAG-CTCCAG-CTCCAG-CTCCAG-CTCCAG-CTCCAG-CTCCAGDesign primers
3347847GGCTCGT-GGCTCGT-GGCTCGT-GGCTCGTDesign primers
3347903GCTCGG-GCTCGG-GCTCGG-GCTCGGDesign primers
3347928CTAGGGGCTCGGG-CTAGGGGCTCGGG-CTAGGGGCTCGGG-CTAGGGGCTCGGG-CTAGGGGCTCGGADesign primers
3347994CTATGGGCTCGGAC-CTATGGGCTCGGAC-CTATGGGCTCGGACDesign primers
3390407GTCCTC-GTGGTC-GTGGTC-GTGGTC-GTGGTC-GTGGTC-GTGGTC-GTGGTC-GTGGTC-GTGGTC-GTGGTC-GTGGTCDesign primers

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