Microsatellites /Tandem Repeats database

Genome: Bifidobacterium longum subsp. infantis ATCC 15697

Search your sequence for microsatellites
This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Info
Percentaje of mismatches allowed within the tandem repeats: 0 | 0.1 | 0.2
 
PositionSequence 
18932CGGCGTTTTACGGCGTCTTCCTGCCTTTTADesign primers
32910ATCGTGTCATATGGTGTAATTTCGTGTAATDesign primers
51213TCATCATCATCTTCACCATCATCCDesign primers
86735ACGTAGTGGATAAGTCGTGGATAAGTGGTGGATDesign primers
90250GCGTTG-CCGTTG-CCGTTG-CCGTTGDesign primers
139068CCGCCATCGCCTCCGCCATGGCCACCGTCATCTCCTDesign primers
160669ATTCTCTCATGGGGCGGTGAATCTCTCATGAGGCGGTTAAACCCTCATGGGGCGGTGDesign primers
218823GGACATGTCCGA-TAACATGTCCGA-TAACATGTCCGADesign primers
224991CTGTGGGTTCTGCCCATA-CTGCTGGTTCTGCCCATA-CTGCTGGTTCTGCCCGTA-TTGTGGGTTCTGCCCATADesign primers
276426GTCCTCGGTGAATTCTCGGTGAGTCCTCGGTAADesign primers
306540GCCATCGAGGCGGCCGTCGACGCGGCGTTCGAGGCGDesign primers
374537CACCGTCGGCACCGTCGAAACCGTCGGDesign primers
444985GGCGCGGACGCGGGCCCGGGCGCADesign primers
463476TGGTG-ATGTG-TTGTG-TTGTG-TTGTG-TTGTGDesign primers
471020GGGGTGTTGCGTGTGATGTTGCGTGTGATGTTGCGTDesign primers
482597CTGATGCGTCCGTGACGGATGCGTCCGTGACGGGTGCGTTCGTGADesign primers
515354AATTCTAAAA-CAATCTAAAA-CAATCTAAAA-AGTTCTAAAADesign primers
592353GGT-GGT-GCT-GGT-GTT-GGT-GAT-GGTDesign primers
599018TTGT-TGGC-TTGC-TTGA-TTGC-TTGC-TTGA-TTGC-TTGCDesign primers
600618TTGTTTGAATGTTTGATTGTCTGADesign primers
611149GTGGGCGTGGCCGTGGTCGTGGGTDesign primers
637821TTCCGT-TGCCGT-TGCCGT-TGCCGT-TTCCGTDesign primers
667638GGCAACGGTAACGGCAATGCCAACDesign primers
676911CGCAGATGACACAGATGACACAGATGADesign primers
714144ACACCGCCACCG-TGACCGCCACCG-TGACCGCCACCGDesign primers
730704ACCGTGACGGTGACAGTGACCATGDesign primers
791131GCCAGC-GCCAGC-GCAAGC-ACCAGCDesign primers
811025AGGCGGCGGGGGCGGCCGCGGGGGCGGCCGCGGGGGDesign primers
830477GGGCTGGCCGTACTG-AGGCTGGCCGTACTG-AGGCTGAGCGTACTGDesign primers
832448GTGGCGGTGACGGTGGCCGTGACGDesign primers
898020GCGGCGGCGTCGGCGGAGGCGTCGDesign primers
1022718TCTGGGGCACCA-CATGGGGCACCA-CATGGGGCACCADesign primers
1085768CGTCCAACTGCGCCCCGCCATGTAACTGCGCCCCGCCATGTAACTGCGCCCCGCDesign primers
1134777TGACGAAGACGATGCCGACGACGADesign primers
1134807GGAAGA-GGATGA-GGACGA-GGACGA-GGAAGADesign primers
1166862TTTCGGTATTTCGGTTTTTAGGTADesign primers
1168215TATTTCGGTTTTTCGGTTTTTCGGDesign primers
1200322AGAATCAGCCAGACTCACCCGGGATCAGCCDesign primers
1227296CAACACAACGAACGACACGACGAACAACACAACGCGDesign primers
1288476CGTTTTAACCAGTTTTAACGGTTTTTAACCDesign primers
1383656GGCGGGGCGTGGGGGGGGGGAGCGGDesign primers
1419364GCGTGAGCATGAGCGTCAGCGCGADesign primers
1429999CGGCGT-GGGCGT-GGGCGT-CGGCGTDesign primers
1430129TTCGCCTCCGCCTCCGCCTTCTCCDesign primers
1453013TCGGTG-ACGGTG-ACGGTG-ACGGTGDesign primers
1519594GCGTGTGCCGAGCGTGTGCCTATCGTGTGCCTADesign primers
1519631AGCCGAAAATAGCCGGATATAGCCGTAAACDesign primers
1596429ACTAATAGA-ACTAATAGA-ACAAATAGADesign primers
1623478CGTCTTCGCGTCTTCATGTCTTCGDesign primers
1635237ACTTCTCCAGCTTCTCCAACTTTTCCADesign primers
1678283AAACACCA-GAACACCA-GAACACCADesign primers
1722369GGTTAAAAACCGTTAAAACCGGTTAAAACGDesign primers
1830198CGCCTGGCCGAGCCGCCATGCCGAGCCGCCATGCCGAGCDesign primers
1974912CCGACCCCGACTGCGACCCCGACGDesign primers
1983066AGCAAC-CGCAAC-CGCAAC-CGCAACDesign primers
2014772AGCGAATCAGCAAATCAGTGAATCDesign primers
2211965TGGGGG-CGGGGG-CGGGGG-CGGGGGDesign primers
2211990CGGCGCCGGAGCCGGAGCCGGAGCGGGCGCCGGAGCDesign primers
2214086CGGTTCCGGCGGTTCCGGCGGTGCGGGCAGTTCCGGCGGGGCCGGCAGTTCCGGDesign primers
2230742GGATGCGGCGGATACGGCGGATGCGGCGGATGCGGADesign primers
2280373CCCTCATAA-TCCTCATAA-TCCTCATAADesign primers
2299390CTTGCCCTAGCCCTTGCTCTTGGCDesign primers
2339980AT-GT-AT-AT-AT-GT-GT-AT-AT-AA-GT-GT-AT-AT-TTDesign primers
2377686GCAGCGGCACCGGCAGCAGCAGCCDesign primers
2401388GGGCATCACGCCGGGCACCGCGCCGGGCACCGCGCCDesign primers
2409812GGCACGGCCACGGTCACGTGCACGDesign primers
2428147CGCCCGCGTAGTGC-GACCCGCGTAGTGC-GACCCGCGTAGTGCDesign primers
2451688TCGCCGACCGCACTCGTCTCGCCGACCGCGCGCATCTCGCCGACCGCACTCGTTDesign primers
2485801GCGGCAGGCACAGACGCGGCAGATGCAGACGCGGCAGGCGCATAGDesign primers
2530799GCGGCCGAGGCCGCAGCCGCGGCCDesign primers
2533830CATCGG-CATCAG-CATCAG-CATCAG-CATCAGDesign primers
2548136GCGCGTGGCATGTGCGGGGCATGTGCGTGGCACDesign primers
2637511CGGCGCGCCCCGCAACCGGCGCGGCCTACAACCGTCGCGGCCCGCAACDesign primers
2638773TGCCTCATGGGGCGGGAAATCCCTCATGGGGCGGTAATTGCCCCATGGGGCCGTAAADesign primers
2659040GCATTCTTCGCATTGTTCCCATTCTTCDesign primers
2705189AACCCGCAT-CACCCGCAT-CACCCGCATDesign primers
2785571CGCAGTCTG-TGCAGTCTG-TGCAGTCTGDesign primers
2785615GCACAGCCCACACAGCCCGCACAGCCGDesign primers
2804473TCGTTGTCATTGTCGTTATCGTCGDesign primers
2813199GCCGGCAACACCGGCGGCAACACCGGCGGCAACAACTCCGGTAACACCDesign primers
2813248GCAACACCG-GCAACACCG-GCAACACCGDesign primers

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