Microsatellites /Tandem Repeats database

Genome: Bacillus cereus AH187

Search your sequence for microsatellites
This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Info
Percentaje of mismatches allowed within the tandem repeats: 0 | 0.1 | 0.2
 
PositionSequence 
207199ATAATTAATT-ATAACTAATT-ATAACTAATT-ATAACTAATTDesign primers
483868ATTGCCGCCCGAGCCATTGCCACCCGAGCCATTGCCGCCCGAGCCDesign primers
484491TGCCATCAGAACCAT-TGCCACCAGAACCAT-TGCCACCAGAACCAT-TGCCACCAGAACCATDesign primers
591335AAAAAG-AAAAAG-AAAAAG-AAAAAGDesign primers
1286361GGTCCAGTC-GGTCCAGTC-GGTCCAGTCDesign primers
1286631GGTCCAGTC-GGTCCAGTC-GGTCCAGTCDesign primers
1618132GTAGCTCCAGAGTCGCCGGTAGCTCCAGTGTCGCCGGTAGCTCCAGTGTCGCCGDesign primers
2065498ACAAAA-AGAAAA-AGAAAA-AGAAAA-AGAAAA-AGAAAA-AGAAAA-AGAAAADesign primers
2376302GGAGCAACA-GGAGCAACA-GGAGCAACA-GGAGCAACADesign primers
2376437GGAGCAACA-GGAGCAACA-GGAGCAACADesign primers
2378346GGAGCAACA-GGAGCAACA-GGAGCAACA-GGAGCAACADesign primers
2378505ACAGGCCCAACAGGAGCAACAGGCCCAACAGGAGCGACAGGTCCAACAGGAGCAACAGGCCCAACAGGAGCADesign primers
2500797ATA-ATA-ATA-ATA-ATA-ATA-ATA-ATA-ATA-ATADesign primers
2703924CAATCTTCTTTTTTTGGTTCA-CAATCCTCTTTTTTTGGCTCA-CAATCCTCTTTTTTTGGCTCA-CAATCCTCTTTTTTTGGCTCA-CAATCCTCTTTTTTTGGTTCA-CAATCCTCTTTTTTTGGTTCADesign primers
2754892GCAAAAGAGATT-GCAAAAGAGATT-GCAAAAGCGATTDesign primers
2955821TGTCCGCCTTGCCAACCACCATGTCCGCCTTGCCAACCACCGTGTCCGCCCGGCCAACCACCATGTCCGCCTTGCCAACCACCATGTCCACCTTGCCAACCACCGTGTCCGCCTTGCCAACCACCGDesign primers
2955957GCCAACCACCGTGTCCACCTT-GCCAACCACCGTGTCCACCTT-GCCAACCACCGTGCCCGCCTTDesign primers
2956040TGCCAACCACCGTGTCCACCTTGCCAACCACCGTGTCCACCCGGCCAACCACCGTGTCCGCCTDesign primers
3109394GTTGTTGCTCTTGTTGTTTCTCTTGTTGTTTCTCTTDesign primers
4331293TTTTCACCTTGGTTGTTGTTTCCACCTTGGTTGTTGTTTCCACCTTGGTTGTTGDesign primers
4331771CTCCGTCTGGTTGTTTGCCTCCGTCTGGTTGTTTACCTCCGTCTGGTTGTTTACCTCCGTCTGGTTGTTTACCTCCGTCTGGTTGTTTGTDesign primers
4331878TCTCCGTCTGGTTGTTTGCCTCCGTCTGGTTGTTTGTCTCCGTCTGGTTGTTTGDesign primers
4513648TTG-TTG-GTG-TTG-TTG-GTG-TTG-TTG-GTGDesign primers
4546464GGATCCACTGGCATCACTGGACCCACTGGCATCACTGGACCCACTGGCATCACTDesign primers
4546981CCACTGGCATCACTGGACCCACTGGCATCACTGGATCTACTGGCATCACTGGACDesign primers
4591426AGGCATGGAAAAAGGTATGGAAAAAGGTATGGAAAADesign primers
4849941CAACTGGGGCAACAGGCT-CAACTGGGGCAACAGGCT-CAACTGGAGCAACAGGCT-CAACTGGGGCAACAGGCT-CAACTGGAGCAACAGGCT-CAACTGGGGCAACAGGCT-CAACTGGAGCAACAGGCTDesign primers
4941101GCTTGT-GCTTGT-GCTTGT-GCTTGT-GCTTGTDesign primers

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