Microsatellites /Tandem Repeats database

Genome: Bacillus cereus AH820

Search your sequence for microsatellites
This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Info
Percentaje of mismatches allowed within the tandem repeats: 0 | 0.1 | 0.2
 
PositionSequence 
202565TAATTATAACTAAATATAACTAATTATAACDesign primers
432784TGCCACCAGAACCGTTGTCACCAGAACCGTTGCCGCCAGAACCGTDesign primers
432858TTGCCGCCAGAACCATTGCCACCAGAACCATTGCCGCCAGAACCGDesign primers
534911GAAAAA-GAAAAA-GAAAAA-GAAAAA-GAAAAADesign primers
544091CGCGAACTATTCGTGAACTATTTGCGAACTATTDesign primers
921213CCAGGCGAAGAAACAGAAAAG-CCAGGTGAAGAAACAGAAAAG-CCGGGTGAAGAAACAGAAAAG-CCAGGTGAAGAAACAGAAAAG-CCAGGTGAAGAAACAGAAAAG-CCAGGTGAAGAAACAGAAAAG-CCAGGTGAAGAAACAGAAAAG-CCAGGTGAAGAAACAGAAAAG-CCAGGTGAAGAAACAGAAAAG-CCAGGTGAAGAAACAGAAAAG-CCAGGTGAAGAAACAGAAAAG-CCAGGTGAAGAAACAGAAAAGDesign primers
1234706TCCAGTTGGCCCAGTTGGTCCAGTTGGTCCAGTTGGTCCAGTTGGCCCAGTCGGDesign primers
1858996TTTAC-TTCAC-TTCAC-TTCAC-TTCAC-TTCACDesign primers
2065753GAATATAAA-GAATATAAA-GAATATAAADesign primers
2342248GCCTGTGGGACCAGTGAT-GCCTGTAGGACCAGTGAT-GCCTGTAGGACCAGTGAT-GCCTGTGGGACCGGTGAT-GCCTGTAGGACCAGTGATDesign primers
2345037CAACAGGTC-CAACAGGTC-CAACAGGTCDesign primers
2751065TAGGTTCA-TAGGTTCA-TAGGTTCADesign primers
2982009GGCTGC-GGCTGC-GGCTGC-GGCTGCDesign primers
3429993ATTTA-ATTTA-ATTTA-ATTTA-ATTTADesign primers
3887542AACATTTTTTGAACATTTATTGAACTTTTTTTGDesign primers
4001024TCTCTATT-TCTCTATT-TCTCTATTDesign primers
4095796CAATATCAACAA-CAATATCAACAA-CAATACCAACAADesign primers
4174036TTG-TTC-TTT-TTC-TTC-TTC-TTT-TTC-TTC-TTC-TTT-TTCDesign primers
4394853GTTATTCCTGTTGCTCCT-GTTATTCCTGTTGCTCCT-GTTATTCCTGTCGCTCCTDesign primers
4394925GTTGCTCCT-GTTGCTCCT-GTTGCTCCTDesign primers
4395003CCCGTTGCTCCCGTTGCTCCTGTTGCT-CCCGTTGCTCCCGTTGCTCCTGTTGCT-CCCGTTGCTCCCGTTGCTCCCGTTGCT-CCCGTTGCTDesign primers
4413785CCTTGGTTGTCATTTCCACCTTGGTTGTCGTTTCCACCTTGGTTGTCGTTTCCADesign primers
4414242CGTCTGGTTGTTTGTCTCCGTCTGGTTGCTTGTCTCCGTCTGGTTGTTTGCCTCCGTCTGGTTGTTTATCTCDesign primers
4414329CTCCGTCTGGTTGTTTAT-CTCCGTCTGGTTGTTTAT-CTCCGTCTGGTTGTTTGTDesign primers
4593210TGATGACCG-TGGTGACCG-TGGTGACCG-TGGTGACCG-TGGTGACCG-TGGTGACCGDesign primers
4663411AAGGTATAGAAC-AAGGTATAGAGC-AAGGTATAGAAC-AAGGTATAGAAC-AAGGTATAGAACDesign primers
5021592AAAACAATA-ACAACAATA-ACAACAATA-ACAACAATA-ACAACAATA-ACAACAATA-ACAACAATA-ACAACAATADesign primers

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