Microsatellites /Tandem Repeats database

Genome: Persephonella marina EX-H1

Search your sequence for microsatellites
This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Info
Percentaje of mismatches allowed within the tandem repeats: 0 | 0.1 | 0.2
 
PositionSequence 
44073GTTTTAAAAGCTGTTAAAAGGTTTTTATAGDesign primers
180470TAGAGAAAGAGATACAGATAGAGCDesign primers
209819AAA-GAA-GAA-GAA-AAA-GAA-AAA-GAADesign primers
357271ATAATCTCCATAATATCCATAATCTGCDesign primers
398119ATTTATTAATTATTATTAATTTTTTATTDesign primers
407024TGAGGAGCTTGAGAAGCTTCAGGAGCTDesign primers
416989AGAACAGGAACAAAAACAAGAACGDesign primers
535638AAATATAAAAATAAATAAAAATCTDesign primers
714003AGAGATAGAGAGAAAGATAAAGATDesign primers
781242CTTATCTTCCCTTCTCTTTCCTTATCTATCDesign primers
802381CAC-CTC-CAC-CAC-CAC-CTC-CAC-CACDesign primers
830644TATCAA-TATCAA-GATCAA-AATCAADesign primers
961219TTTAA-AATAT-TATAA-TATAT-TATAT-AATATDesign primers
983387TTTTTCCTTTTCATTTTCTCTTTCDesign primers
1127123TGGTGCTGCTGCAGGTGCTGCTGCDesign primers
1153307AAAGAAGAAGAAAAAGGAACAGAADesign primers
1234968TATAAAAATATAAAGATATAAAAGDesign primers
1236112ATCTAAATCAAAATCTACATTTAADesign primers
1324925ATCTTCATTTTCATCTTAATCTCCDesign primers
1354143AACAAAAACAGAAACTAAAACTAADesign primers
1482052GGATGTTGAGGAAGTTGAGGATTTTGADesign primers
1495384AG-AA-AA-CA-AA-GG-AA-AA-GA-TA-AA-AA-ADesign primers
1627791TAAAAAAGGTAAAAAGGGTAAAAAATGDesign primers
1703199TTAAAAATATTCAAAAAAATTTGAAAATATDesign primers
1889231AAAAATAAAAAAATCAAAAAATACDesign primers

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