Microsatellites /Tandem Repeats database

Genome: Desulfovibrio magneticus RS-1

Search your sequence for microsatellites
This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Info
Percentaje of mismatches allowed within the tandem repeats: 0 | 0.1 | 0.2
 
PositionSequence 
267243GGCGGGTCCGGGCAGCGCCC-GGCGGGTCCGGGCAGCGCCC-GGCGGGTCCGGGCAGCGCCC-GGCGGGTCCGGGCAGCGCCCDesign primers
295972CATGCCGCC-CATGCCGCC-CATGCCGCCDesign primers
858246CGCGGCCAA-CGCGGCCAA-CGCGGCCAA-CGCGGCCAA-CGCGGCCAA-CGCGGCCAADesign primers
954535GGGAAGA-GGGAAGA-GGGAAGA-GGGAAGADesign primers
1265693GGGCAGAG-GGGCAGAG-GGGCAGAGDesign primers
1273657CGGCGGCGA-CGGCGGCGA-CGGCGGCGADesign primers
1291184GCCAGG-GCCAGG-GCCAGG-GCCAGGDesign primers
1851656TCGCTGG-TCGCTGG-TCGCTGG-TCGCTGG-TCGCTGG-TCGCTGG-TCGCTGG-TCGCTGG-TCGCTGG-TCGCTGG-TCGCTGG-TCGCTGG-TCGCTGGDesign primers
1910273GCGGTGCAGGACCGG-GCGGTGCAGGACCGG-GCGGTGCAGGACCGG-GCGGTGCAGGACCGG-GCGGTGCAGGACCGG-GCGGTGCAGGACCGGDesign primers
2025900GGGCCG-GGGCCG-GGGCCG-GGGCCGDesign primers
2139087GCCCGCGGCTGCACC-GCCCGCGGCTGCACC-GCCCGCGGCTGCACCDesign primers
3431070AGGAGAGC-AGGAGAGC-AGGAGAGC-AGGAGAGC-AGGAGAGC-AGGAGAGCDesign primers
4189043CATCCCAACGAT-CATCCCAACGAT-CATCCCAACGATDesign primers
4190073GCGGGCGGT-GCGGGCGGT-GCGGGCGGTDesign primers
4306865GCATGGCCT-GCATGGCCT-GCATGGCCTDesign primers
4310122CACGGCGGC-CACGGCGGC-CACGGCGGCDesign primers
4365392GTCCTT-GTCCTT-GTCCTT-GTCCTT-GTCCTT-GTCCTTDesign primers
4509461GTAA-GTAA-GTAA-GTAA-GTAA-GTAADesign primers
5120606AAGAGGG-AAGAGGG-AAGAGGG-AAGAGGGDesign primers
5215666TGGCCG-TGGCCG-TGGCCG-TGGCCGDesign primers

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