Microsatellites /Tandem Repeats database

Genome: Desulfovibrio magneticus RS-1

Search your sequence for microsatellites
This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Info
Percentaje of mismatches allowed within the tandem repeats: 0 | 0.1 | 0.2
 
PositionSequence 
267239CCCTGGCGGGTCCGGGCAGC-GCCCGGCGGGTCCGGGCAGC-GCCCGGCGGGTCCGGGCAGC-GCCCGGCGGGTCCGGGCAGCDesign primers
295972CATGCCGCC-CATGCCGCC-CATGCCGCCDesign primers
747489GACCAGGCCGCCGCCCAGGCCGCCGCCCAGGCCGCCDesign primers
858245CCGCGGCCA-ACGCGGCCA-ACGCGGCCA-ACGCGGCCA-ACGCGGCCA-ACGCGGCCADesign primers
954535GGGAAGA-GGGAAGA-GGGAAGA-GGGAAGADesign primers
1265693GGGCAGAG-GGGCAGAG-GGGCAGAGDesign primers
1273657CGGCGGCGA-CGGCGGCGA-CGGCGGCGADesign primers
1291184GCCAGG-GCCAGG-GCCAGG-GCCAGGDesign primers
1473746GGCTGCACGGGTGGCTGCTGGGGCTGCATGGGCGGCTGCTGGGGCTGCATGGGCGGCTGCTGGDesign primers
1576103AACCCACGTCAACCCACGCCAACCCACGGCDesign primers
1624029TGTGACCAAAATCTCCATAGTCCGTGACCGAAATCTCCATAGTCTGTGACCAAACTCTCCATAGTCDesign primers
1851653TTCTCGC-TGGTCGC-TGGTCGC-TGGTCGC-TGGTCGC-TGGTCGC-TGGTCGC-TGGTCGC-TGGTCGC-TGGTCGC-TGGTCGC-TGGTCGCDesign primers
1910272AGCGGTGCAGGACCG-GGCGGTGCAGGACCG-GGCGGTGCAGGACCG-GGCGGTGCAGGACCG-GGCGGTGCAGGACCG-GGCGGTGCAGGACCGDesign primers
2025900GGGCCG-GGGCCG-GGGCCG-GGGCCGDesign primers
2139085CAGCCCGCGGCTGCACCGCCCGCGGCTGCACCGCCCGCGGCTGCADesign primers
3431057AGAGCAGG-AGAGTAGG-AGAGCAGG-AGAGCAGG-AGAGCAGG-AGAGCAGG-AGAGCAGG-AGAGCAGGDesign primers
4189041AGCATCCCAACGATCATCCCAACGATCATCCCAACGDesign primers
4190073GCGGGCGGT-GCGGGCGGT-GCGGGCGGTDesign primers
4306865GCATGGCCT-GCATGGCCT-GCATGGCCTDesign primers
4310122CACGGCGGC-CACGGCGGC-CACGGCGGCDesign primers
4350306GGT-TGC-GGC-GGC-GGT-TCC-GGC-GGC-GGC-TGC-GGC-GGCDesign primers
4365388CCTCGT-CCTTGT-CCTTGT-CCTTGT-CCTTGT-CCTTGTDesign primers
4509461GTAA-GTAA-GTAA-GTAA-GTAA-GTAADesign primers
5120606AAGAGGG-AAGAGGG-AAGAGGG-AAGAGGGDesign primers
5215666TGGCCG-TGGCCG-TGGCCG-TGGCCGDesign primers

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