This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Percentaje of mismatches allowed within the tandem repeats:
0 |
0.1 |
0.2
| Position | Sequence | |
| 203 | CAC-CAC-CAT-TAC-CAC-CAC-CAT-CAC-CAC-CAC-CAT-CAC | Design primers |
| 64016 | CCTGGACGGTGCTAC-CCTGGACGGTGCTAC-CGTGGACGGTGCTAC | Design primers |
| 252292 | TCTGAC-TCTGAC-TCTGAC-TCTGAC | Design primers |
| 273975 | AAAGGT-GAAGGT-GAAGGT-GAAGGT-GAAGGT-GAAGGT-GAAGGT-GAAGGT-GAAGGT-GAAGGT | Design primers |
| 1464605 | TGCAAA-TGCAAA-TGCAAA-TGCAAA-TGCAAA | Design primers |
| 1965404 | AGCAGAAC-AGCAGAAC-AGCAGAAC-AGCAGAAC-AGCAGAAC | Design primers |
| 2117846 | GGGCCTGCC-GGGCCTGCC-GGGCCTGCC | Design primers |
| 2618545 | TGAAAATATTCCA-AGAAAATATTCCA-AGAAAATATTCCA | Design primers |
| 2857798 | CAAGAC-CACGAC-CACGAC-CACGAC-CACGAC-CACGAC | Design primers |
| 3549372 | AACAAA-TAGAAA-TAGAAA-TAGAAA-TAGAAA-TAGAAA-TAGAAA-TAGAAA-TAGAAA-TAGAAA-TAGAAA-TAGAAA-TAGAAA-TAGAAA-TAGAAA-TAGAAA | Design primers |
| 3550809 | ATTGGC-TCTGGC-TCTGGC-TCTGGC-TCTGGC-TCTGGC-TCTGGC-TCTGGC-TCTGGC-TCTGGC-TCTGGC-TCTGGC-TCTGGC-TCTGGC-TCTGGC-TCTGGC | Design primers |
| 4491608 | GCCGCCAGC-ACCGCCAGC-ACCGCCAGC-ACCGCCAGC-ACCGCCAGC-ACCGCCAGC | Design primers |
| 4840702 | CGGTGC-AGGTGC-AGGTGC-AGGTGC-AGGTGC-AGGTGC-AGGTGC-AGGTGC-AGGTGC-AGGTGC | Design primers |
| 5362785 | CAGAAGTTAAATAATCTA-CAGAAGTTAAATAATCTA-CAGAAGTTAAATAATATA-CAGAAGTTAAATAATATA | Design primers |
| 5362858 | AGGAGTTAAATAATTCGC-AGGAGTTAAATAATTCGC-AGGAGTTAAATAACTCGC | Design primers |
| 5455769 | TATCTT-TATCTT-TATCTT-TATCTT | Design primers |
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