Microsatellites /Tandem Repeats database

Genome: Brucella microti CCM 4915

Search your sequence for microsatellites
This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Info
Percentaje of mismatches allowed within the tandem repeats: 0 | 0.1 | 0.2
 
PositionSequence 
28828TCTTCCTCTTCGGCTTCCTCTTCADesign primers
38383AATGGCGGGAGAAAGGGCGGGAGAAATGGCCAGAGADesign primers
39112TAAGGGAGTAAGGGAATAGGGGAGTAAGGGGGDesign primers
39201TCCCCTATTCCCTTATTCCCCTACTCCCCTAADesign primers
63552TAAGGCAATAGGGCAATAAGGCAGDesign primers
63581TAAGGGAATAGGGGAATAAGGGAGDesign primers
63648TTCTTCAC-TGCCCTAC-TGCCCTAC-TGCCCTAC-TGCCCTAC-TGCCCTAC-TGCCCTAC-TGCCCTAC-TGCCCTAC-TGCCCTAC-TGCCCTAC-TGCCCTAC-TGCCCTAC-TGCCCTAC-TGCCCTACDesign primers
64292AGGGCAACAGGGCGACAGGGCAATDesign primers
65578TAAGGGAATAGGGGAATAAGGGAGDesign primers
65646CTTCACTG-CCCTACTG-CCCTACTG-CCCTACTG-CCCTACTG-CCCTACTGDesign primers
88536TAAGGGAATAGGGGAATAAGGGAGDesign primers
88605TTCACTGC-CCTACTGC-CCTACTGC-CCTACTGC-CCTACTGC-CCTACTGCDesign primers
440844TAAGGGAATAGGGGAATAAGGGAGDesign primers
440910TTCTTTAC-TGCCCTAC-TGCCCTAC-TGCCCTAC-TGCCCTAC-TGCCCTAC-TGCCCTAC-TGCCCTACDesign primers
479770CACTGCCC-TACTGCCC-TACTGCCC-TACTGCCCDesign primers
550859GGCAGTAAGGCAATAAGGCAGTATDesign primers
550980TGCCCTACTGCCTTACTGCCCTATDesign primers
561071AGGGGAATAAGGGAATAGGGGAATAGGGGAGTDesign primers
561238GCCCTACAGCCCTACTGCCCTAAADesign primers
623586GTAGGGGA-ATAGGGGA-ATAGGGGADesign primers
623659TACTGCCTTACTGTCTTACTGCCCDesign primers
739565TTAGGGGA-ATAGGGGA-ATAGGGGA-ATAGGGGADesign primers
739664TTCCCTTA-CTCCCTTA-CTCCCTTA-CTCCCTTA-CTCCCTTADesign primers
755481TCGCCGATATTGAGATTGCCAATATTGAAATTGCCAATATTGAAADesign primers
850947GCGCGGGCGCTGGCGCGCGCGCTGDesign primers
1026420CCGCATCGGCCGCACCGGCCGCAACGGDesign primers
1212168CGAAGA-GGAAGA-GGAAGA-GGAAGADesign primers
1221214GCGGCAGCAGCAGGGGCAGCGCCACCGGCAGCAGCADesign primers
1246050CACCGGCACTGGCACCGGCACTGGCACCGGDesign primers
1275492GTCTCCATGATGGGCTTCATGATGGGCTTCATGATGDesign primers
1290638TGCTTGATACGG-GGCTTGATACGG-GGCTCGATACGGDesign primers
1318198CAGCACGGCCAGCATGGCCAGCATGGCDesign primers
1378499TTCATCTGAAATAGCGGGTCATCTGAAATAACGCTTCATCTGACATAACAGDesign primers
1406937GTAAGGGC-AGTAGGGC-AGTAGGGC-AGTAGGGC-AGTAGGGC-AGTAGGGCDesign primers
1407026TACTCCCCTACTCCCTTATTCCCCTATTCCCCDesign primers
1407069CATACTGCCTTACTGCCCTATTGCCTTACTGCCTTACTGCCTTATTCCDesign primers
1472826TTTCGGTCATGGTTTCGGTCACGGCTTTGGTCATGGDesign primers
1492083CCGGCTCCGCCTCCGGCTTCGGCTDesign primers
1595993TACTGCCCTACTGCCGTATTGCCCDesign primers
1706449TGGCCGCGATTCTGGTTGCCACGATGCTGGTTTCCACGATTCTGGDesign primers
1800685TACTGCCCTACTGCCGTATTGCCCDesign primers
1890001CGCAGAGTTAGTGGGCAGAGCTAGTGGGCAGAGTTAGTGDesign primers
1911985ATGAAACCCGCAATGAAACCTGTAATGAAACCCGGCDesign primers
1939532GGT-GGA-GGA-GGA-GGC-GGA-GGA-GGADesign primers
1952300ACCATGACCATCATCATGACCACGDesign primers
1968989TGATCGTTATGATGATCGTGATGGTGATCGTGGTGADesign primers
2003617GGCGCGCCGGCGCACCGCCGCGCCDesign primers
2070211TGTAATATTAGTGTCATATGAGTGTAATATACGDesign primers
2091923GCGGGCCCATGAGCGGGTCCTTGAGCAGGCCCTTGADesign primers

Please help us improve this resource by reporting problems, suggestions etc.