This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Percentaje of mismatches allowed within the tandem repeats:
0 |
0.1 |
0.2
| Position | Sequence | |
| 165217 | ATAGATT-ATAGATT-ATAGATT-ATAGATT-ATAGATT-ATAGATT-ATAGATT-ATAGATT-ATAGATT | Design primers |
| 584058 | TAAAAGAG-TAAAAGAG-TAAAAGAG-TAAAAGAG-TAAAAGAG-TAAAAGAG-TAAAAGAG-TAAAAGAG | Design primers |
| 596458 | TAAATAGGATGTAAAAG-TAAATAGGATGTAAAAG-TAAATAGGATGTAAAAG-TAAATAGGATGTAAAAG-TAAATAGGATGTAAAAG | Design primers |
| 615845 | TATATTGG-TATATTGG-TATATTGG | Design primers |
| 677963 | AAGAGC-AAGAGC-AAGAGC-AAGAGC-AAGAGC-AAGAGC-AAGAGC-AAGAGC-AAGAGC-AAGAGC-AAGAGC-AAGAGC-AAGAGC-AAGAGC | Design primers |
| 755049 | TAGATATTTAATTAAGTGG-TAGATATTTAATTAAGTGG-TAGATATTTAATTAAGTGG-TAGATATTTAATTAAGTGG-TAGATATTTAATTAAGTGG-TAGATATTTAATTAAGTGG-TAGATATTTAATTAAGTGG-TAGATATTTAATTAAGTGG-TAGATATTTAATTAAGTGG-TAGATATTTAATTAAGTGG | Design primers |
| 782943 | TCAAGTATTTCTATAGAT-TCAAGTATTTCTATAGAT-TCAAGTATTTCTATAGAT | Design primers |
| 1097964 | TTGTGTGT-TTGTGTGT-TTGTGTGT | Design primers |
| 1180662 | CTT-CTT-TTT-CTT-CTT-TTT-CTT-CTT-TTT | Design primers |
| 2465304 | ATAAAATCCTTATTTTA-ATAAAATCCTTATTTTA-ATAAAATCCTTATTTTA | Design primers |
| 3047676 | TTTTTGTAATC-TTTTTGTAATC-TTTTTGTAATC | Design primers |
| 3068633 | TATTGC-TATTGC-TATTGC-TATTGC-TATTGC-TATTGC-TATTGC-TATTGC-TATTGC-TATTGC-TATTGC-TATTGC-TATTGC-TATTGC-TATTGC-TATTGC-TATTGC-TATTGC-TATTGC-TATTGC-TATTGC-TATTGC-TATTGC-TATTGC-TATTGC-TATTGC-TATTGC-TATTGC-TATTGC-TATTGC-TATTGC-TATTGC-TATTGC-TATTGC-TATTGC-TATTGC-TATTGC-TATTGC-TATTGC-TATTGC-TATTGC-TATTGC-TATTGC-TATTGC-TATTGC-TATTGC-TATTGC-TATTGC-TATTGC | Design primers |
| 3511428 | TTCTATC-TTCTATC-TTCTATC-TTCTATC-TTCTATC-TTCTATC-TTCTATC-TTCTATC-TTCTATC-TTCTATC | Design primers |
| 3727804 | GTTGCTCCG-GTTGCTCCG-GTTGCTCCG | Design primers |
| 3916374 | TCTTCATAT-TCTTCATAT-TCTTCATAT | Design primers |
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