This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Percentaje of mismatches allowed within the tandem repeats:
0 |
0.1 |
0.2
| Position | Sequence | |
| 165215 | GAATAGA-TTATAGA-TTATAGA-TTATAGA-TTATAGA-TTATAGA-TTATAGA-TTATAGA-TTATAGA | Design primers |
| 584056 | TTTAAAAG-AGTAAAAG-AGTAAAAG-AGTAAAAG-AGTAAAAG-AGTAAAAG-AGTAAAAG-AGTAAAAG-AGTAAAAG | Design primers |
| 596457 | ATAAATAGGATGTAAAA-GTAAATAGGATGTAAAA-GTAAATAGGATGTAAAA-GTAAATAGGATGTAAAA-GTAAATAGGATGTAAAA-GTAAATAGGATGTAAAA | Design primers |
| 615845 | TATATTGG-TATATTGG-TATATTGG | Design primers |
| 677961 | TTAAGA-GCAAGA-GCAAGA-GCAAGA-GCAAGA-GCAAGA-GCAAGA-GCAAGA-GCAAGA-GCAAGA-GCAAGA-GCAAGA | Design primers |
| 755041 | TTAAGTGATAGATATTTAA-TTAAGTGGTAGATATTTAA-TTAAGTGGTAGATATTTAA-TTAAGTGGTAGATATTTAA-TTAAGTGGTAGATATTTAA-TTAAGTGGTAGATATTTAA-TTAAGTGGTAGATATTTAA-TTAAGTGGTAGATATTTAA-TTAAGTGGTAGATATTTAA-TTAAGTGGTAGATATTTAA-TTAAGTGGTAGATATTTAA | Design primers |
| 757276 | GTATTGATTAAGTATTTATTAAGTATTGAATAA | Design primers |
| 782942 | CTCAAGTATTTCTATAGA-TTCAAGTATTTCTATAGA-TTCAAGTATTTCTATAGA | Design primers |
| 1097964 | TTGTGTGT-TTGTGTGT-TTGTGTGT | Design primers |
| 1180662 | CTT-CTT-TTT-CTT-CTT-TTT-CTT-CTT-TTT | Design primers |
| 1523644 | TTATAATTAAACAACTTGTAATTAAACAACTTGTAATTAAACAAC | Design primers |
| 2256413 | ATTTTTTTAAATTCTTTTAAATTTTTTTTA | Design primers |
| 2465302 | TCATAAAATCCTTATTTTAATAAAATCCTTATTTTAATAAAATCCTTATTT | Design primers |
| 2503381 | ACATAATAAAACATAACAAAACATTATAAAACATAACAAA | Design primers |
| 3047675 | TTTTTTGTAAT-CTTTTTGTAAT-CTTTTTGTAAT | Design primers |
| 3068630 | TTTTAT-TGCTAT-TGCTAT-TGCTAT-TGCTAT-TGCTAT-TGCTAT-TGCTAT-TGCTAT-TGCTAT-TGCTAT-TGCTAT-TGCTAT-TGCTAT-TGCTAT-TGCTAT-TGCTAT-TGCTAT-TGCTAT-TGCTAT-TGCTAT-TGCTAT-TGCTAT-TGCTAT-TGCTAT-TGCTAT-TGCTAT-TGCTAT-TGCTAT-TGCTAT-TGCTAT-TGCTAT-TGCTAT-TGCTAT-TGCTAT-TGCTAT-TGCTAT-TGCTAT-TGCTAT-TGCTAT-TGCTAT-TGCTAT-TGCTAT-TGCTAT-TGCTAT-TGCTAT-TGCTAT-TGCTAT | Design primers |
| 3087595 | TTATTTTCTATTTATTTTCTCTTTATTTTCCAT | Design primers |
| 3416334 | TT-TA-AG-CT-TT-TA-TA-TT-TT-TT-AA-AC-TT-TT-AT-AT-TT-TT-TA-AA-CT-TT-TA-TA-TT-T | Design primers |
| 3511424 | AATTTTC-TATCTTC-TATCTTC-TATCTTC-TATCTTC-TATCTTC-TATCTTC-TATCTTC-TATCTTC | Design primers |
| 3727804 | GTTGCTCCG-GTTGCTCCG-GTTGCTCCG | Design primers |
| 3916374 | TCTTCATAT-TCTTCATAT-TCTTCATAT | Design primers |
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