Microsatellites /Tandem Repeats database

Genome: Vibrio sp. Ex25

Search your sequence for microsatellites
This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Info
Percentaje of mismatches allowed within the tandem repeats: 0 | 0.1 | 0.2
 
PositionSequence 
70659CATCACCACCGTCACCACCATCACCGCDesign primers
175953AA-AT-AA-AA-AA-AT-AA-AG-AA-AA-AA-AADesign primers
179294TCAACATCTACT-TCAACATCTACT-TCTACTTCTACTDesign primers
227890AAACCAAT-CAACCAAT-CAACCAATDesign primers
329381TTTTT-ATTTT-ATTTT-TGTTT-TGTTTDesign primers
491103TTTCTAG-CTTCTAG-CTTCTAG-CTTCTAG-CTTCTAG-TTTCTAG-CTTCTAGDesign primers
555999GCCCCAGCAGAAGCAGAAGCAGAAGCAGAAGCAGAAGCAGAAGCAGAAGCAGAADesign primers
564508TTACGCAGTTTACGCAGAGTACGCAGTDesign primers
616151TTTGCT-TCTCTA-TCTCTA-TCTCTA-TCTCTA-TCTCTA-TCTCTA-TCTCTA-TCTCTA-TCTCTA-TCTCTA-TCTCTADesign primers
639705CTGGAGCTTCTGCTGCTGGCGCTTCTGCTACTGGTGCCGCTGCTGDesign primers
674359CATGGGCGGCATGGGTGGCATGGGCGGTATGGGCGGDesign primers
743520TCATGACCATGATCACGATGATGADesign primers
892766TTTTTATTTTCATTTTGATTCTTADesign primers
926227GCTAGAAA-CAGAGAAA-CAGAGAAA-CAGAGAAA-CAGAGAAA-CAGAGAAADesign primers
960540AATTAGT-GATTAGT-GATTAGT-GATTAGTDesign primers
1110633GTGGTGCTGGTGTTGGTGGTGGTCDesign primers
1117404GAAGCGAAACGTGAAGCTGAAGAA-GCAGCACAACGTGAAGCAGAAGAA-GCAGCAAAACGTGCAGCAGAAGAA-GCTGCAAAACGTGAAGCTGAAGAA-GCTGCAAAACGTGAAGCTGAAGAA-GCTGCAAAACGTGAAGCGGAAGAA-AAAGCGAAACGTGAAGCTGAAGAADesign primers
1168321CTTTTTCATTTTTAGGGACTTTTTCATTTTTGGGGACTTTTTCATTTATGGAGADesign primers
1364122CAGCTCCAACTCCGGCTCCAGCACDesign primers
1367433CATCTG-CAGAGC-CAGAGC-CAGAGC-CAGAGC-CAGAGC-CAGAGC-CAGAGC-CAGAGC-CAGAGC-CAGAGC-CAGAGCDesign primers
1625764CGACCT-TGACCT-TGACCT-TGACCTDesign primers
1776847TGCTGTTGATGTTGCTGGTGCTGCDesign primers
2326056CTGCTTTTGCTTCTTCTTCTGCTCDesign primers
2615876CACCACCGCCGCCACCGCCACCGCCGCDesign primers
3140878AACCAGAACCACAAACAGAAGCAGDesign primers

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