Microsatellites /Tandem Repeats database

Genome: Gardnerella vaginalis 409-05

Search your sequence for microsatellites
This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Info
Percentaje of mismatches allowed within the tandem repeats: 0 | 0.1 | 0.2
 
PositionSequence 
94488AAAACT-AAAACT-AAAACT-AAAACTDesign primers
335307GCTCCTGCA-GCTCCTGCA-GCTCCTGCA-GCTCCTGCA-GCTCCTGCA-GCTCCTGCA-GCTCCTGCA-GCTCCTGCADesign primers
376383TTAACGCAATGTTG-TTAACGCAATGTTG-TTAACGCAATGTTG-TTAACGCAATGTTGDesign primers
381991TTAGTAAGCGT-TTAGTAAGCGT-TTAGTAAGCGTDesign primers
393428TCAAGAATCAGTGCCTCC-TCAAGAATCAGTGCCTCC-TCAAGAATCAGTGCCTCCDesign primers
438468AAGTAAGTGTAA-AAGTAAGTGTAA-AAGTAAGTGTAADesign primers
454169CGAAACCAACTTAAC-CGAAACCAACTTAAC-CGAAACCAACTTAACDesign primers
461715CTGGTAATA-CTGGTAATA-CTGGTAATADesign primers
577664GACA-GACA-GACA-GACA-GACA-GACA-GACA-GACA-GACA-GACADesign primers
583375AAGTATCGC-AAGTATCGC-AAGTATCGCDesign primers
846334AAATGAGT-AAATGAGT-AAATGAGTDesign primers
1022554CTACTTACGCAAGATTATTAG-CTACTTACGCAAGATTATTAG-CTACTTACGCAAGATTATTAGDesign primers
1206304TTATTTATTCT-TTATTTATTCT-TTATTTATTCTDesign primers

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