This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Percentaje of mismatches allowed within the tandem repeats:
0 |
0.1 |
0.2
| Position | Sequence | |
| 31148 | GAAACTCCCGCTCAGGCT-GAAACTCCCGCTCAGGCT-GAAACTCCCGCTCAGGCT-GAAACTCCCGCTCAGGCT-GAAACTCCCGCTCAGGCT-GAAACTCCCGCTCAGGCT-GAAACTCCCGCTCAGGCT | Design primers |
| 709525 | TCAGTAAT-TCAGTAAT-TCAGTAAT-TCAGTAAT | Design primers |
| 1315129 | GATAGGCCC-GATAGGCCC-GATAGGCCC-GATAGGCCC-GATAGGCCC-GATAGGCCC-GATAGGCCC-GATAGGCCC | Design primers |
| 1621824 | TATTCA-TATTCA-TATTCA-TATTCA-TATTCA | Design primers |
| 1622086 | ATTTAAGG-ATTTAAGG-ATTTAAGG | Design primers |
| 1946326 | TGGTGCTT-TGGTGCTT-TGGTGCTT-TGGTGCTT-TGGTGCTT-TGGTGCTT-TGGTGCTT-TGGTGCTT-TGGTGCTT-TGGTGCTT-TGGTGCTT-TGGTGCTT-TGGTGCTT-TGGTGCTT-TGGTGCTT-TGGTGCTT-TGGTGCTT-TGGTGCTT-TGGTGCTT-TGGTGCTT-TGGTGCTT-TGGTGCTT | Design primers |
| 2226707 | TGGCACT-TGGCACT-TGGCACT-TGGCACT-TGGCACT-TGGCACT-TGGCACT-TGGCACT-TGGCACT-TGGCACT-TGGCACT-TGGCACT-TGGCACT-TGGCACT-TGGCACT-TGGCACT-TGGCACT-TGGCACT-TGGCACT-TGGCACT | Design primers |
| 2570159 | CGGACCCCTTTAGA-CGGACCCCTTTAGA-CGGACCCCTTTAGA-CGGACCCCTTTAGA | Design primers |
| 3101810 | CGATGGATGACCCCTTTGTT-CGATGGATGACCCCTTTGTT-CGATGGATGACCCCTTTGTT | Design primers |
| 3335435 | GCCGCCGCCACCCAA-GCCGCCGCCACCCAA-GCCGCCGCCACCCAA-GCCGCCGCCACCCAA-GCCGCCGCCACCCAA-GCCGCCGCCACCCAA | Design primers |
| 3524136 | CTCCTGAGGTGGAATAGC-CTCCTGAGGTGGAATAGC-CTCCTGAGGTGGAATAGC-CTCCTGAGGTGGAATAGC-CTCCTGAGGTGGAATAGC-CTCCTGAGGTGGAATAGC-CTCCTGAGGTGGAATAGC-CTCCTGAGGTGGAATAGC-CTCCTGAGGTGGAATAGC-CTCCTGAGGTGGAATAGC-CTCCTGAGGTGGAATAGC | Design primers |
| 3827666 | ACCAATAGAGGGGAACAGC-ACCAATAGAGGGGAACAGC-ACCAATAGAGGGGAACAGC-ACCAATAGAGGGGAACAGC-ACCAATAGAGGGGAACAGC | Design primers |
| 4046010 | TGCCCGATA-TGCCCGATA-TGCCCGATA | Design primers |
|
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