This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Percentaje of mismatches allowed within the tandem repeats:
0 |
0.1 |
0.2
| Position | Sequence | |
| 31134 | CTCCCGCTCAGGCCGAAA-CTCCCGCTCAGGCTGAAA-CTCCCGCTCAGGCTGAAA-CTCCCGCTCAGGCTGAAA-CTCCCGCTCAGGCTGAAA-CTCCCGCTCAGGCTGAAA-CTCCCGCTCAGGCTGAAA | Design primers |
| 709525 | TCAGTAAT-TCAGTAAT-TCAGTAAT-TCAGTAAT | Design primers |
| 1315126 | CCGGATAGG-CCCGATAGG-CCCGATAGG-CCCGATAGG-CCCGATAGG-CCCGATAGG-CCCGATAGG-CCCGATAGG | Design primers |
| 1621824 | TATTCA-TATTCA-TATTCA-TATTCA-TATTCA | Design primers |
| 1622086 | ATTTAAGG-ATTTAAGG-ATTTAAGG | Design primers |
| 1946324 | GCTGGTGC-TTTGGTGC-TTTGGTGC-TTTGGTGC-TTTGGTGC-TTTGGTGC-TTTGGTGC-TTTGGTGC-TTTGGTGC-TTTGGTGC-TTTGGTGC-TTTGGTGC-TTTGGTGC-TTTGGTGC-TTTGGTGC-TTTGGTGC-TTTGGTGC-TTTGGTGC-TTTGGTGC-TTTGGTGC-TTTGGTGC | Design primers |
| 2226703 | GACCTGG-CACTTGG-CACTTGG-CACTTGG-CACTTGG-CACTTGG-CACTTGG-CACTTGG-CACTTGG-CACTTGG-CACTTGG-CACTTGG-CACTTGG-CACTTGG-CACTTGG-CACTTGG-CACTTGG-CACTTGG-CACTTGG-CACTTGG-CACTTGG | Design primers |
| 2570158 | GCGGACCCCTTTAG-ACGGACCCCTTTAG-ACGGACCCCTTTAG-ACGGACCCCTTTAG | Design primers |
| 3101807 | ATGCGATGGATGACCCCTTTGTTCGATGGATGACCCCTTTGTTCGATGGATGACCCCTTT | Design primers |
| 3335414 | ACCCATGCCGCCGCC-ACCCATGCCGCCGCC-ACCCAAGCCGCCGCC-ACCCAAGCCGCCGCC-ACCCAAGCCGCCGCC-ACCCAAGCCGCCGCC-ACCCAAGCCGCCGCC | Design primers |
| 3335520 | CCCAAGCCACCGCCACCCAAGCCGCCGCCACCCAAGCCACCGCCG | Design primers |
| 3524134 | GTCTCCTGAGGTGGAATAGCCTCCTGAGGTGGAATAGCCTCCTGAGGTGGAATAGCCTCCTGAGGTGGAATAGCCTCCTGAGGTGGAATAGCCTCCTGAGGTGGAATAGCCTCCTGAGGTGGAATAGCCTCCTGAGGTGGAATAGCCTCCTGAGGTGGAATAGCCTCCTGAGGTGGAATAGCCTCCTGAGGTGGAATAGCCTCCTGAGGTGGAATAGTCTCCTGAGGCGGAATA | Design primers |
| 3827665 | AACCAATAGAGGGGAACAG-CACCAATAGAGGGGAACAG-CACCAATAGAGGGGAACAG-CACCAATAGAGGGGAACAG-CACCAATAGAGGGGAACAG | Design primers |
| 4046010 | TGCCCGATA-TGCCCGATA-TGCCCGATA | Design primers |
|
Please help us improve this resource by reporting problems, suggestions etc.