Microsatellites /Tandem Repeats database

Genome: Lactobacillus plantarum subsp. plantarum ST-III

Search your sequence for microsatellites

This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Info

Percentaje of mismatches allowed within the tandem repeats: 0 | 0.1 | 0.2
 
PositionSequence 
179268AGCAGT-AGCAGT-AGCAGT-AGCAGT-AGCAGT-AGCAGT-AGCAGT-AGCAGT-AGCAGT-AGCAGT-AGCAGTDesign primers
1162751CGATTCGGACTCGGACAG-CGATTCGGACTCGGACAG-CGATTCGGACTCGGACAGDesign primers
2455877TTTCAGGGG-TTTCAGGGG-TTTCAGGGG-TTTCAGGGGDesign primers
2712780TGCCACTGCTAT-TGCCACTGCTAT-TGCCACTGCTAT-TGCCACTGCTATDesign primers
3182618CACTGTTCGCTGCACTACTGGTTA-CACTGTTCGCTGCACTACTGGTTA-CACTGTTCGCTGCACTACTGGTTA-CACTGTTCGCTGCACTACTGGTTA-CACTGTTCGCTGCACTACTGGTTADesign primers

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