Microsatellites /Tandem Repeats database

Genome: Rhodomicrobium equis 103S

Search your sequence for microsatellites
This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Info
Percentaje of mismatches allowed within the tandem repeats: 0 | 0.1 | 0.2
 
PositionSequence 
59273CGGTTCGAG-CGGTTCGAG-CGGTTCGAGDesign primers
270128CACTGCCGCACCGAACAG-CACTGCCGCACCGAACAG-CACTGCCGCACCGAACAG-CACTGCCGCACCGAACAGDesign primers
389046CAGCCGGAACCACAGCGG-CAGCCGGAACCACAGCGG-CAGCCGGAACCACAGCGGDesign primers
811552GCAGGT-GCAGGT-GCAGGT-GCAGGT-GCAGGTDesign primers
1444770GCCGAA-GCCGAA-GCCGAA-GCCGAA-GCCGAADesign primers
1988695TCGGTGTCGTGGTGC-TCGGTGTCGTGGTGC-TCGGTGTCGTGGTGCDesign primers
2230240CGGATGC-CGGATGC-CGGATGC-CGGATGC-CGGATGCDesign primers
2779948CGTGCC-CGTGCC-CGTGCC-CGTGCCDesign primers
2925525CCGCGG-CCGCGG-CCGCGG-CCGCGGDesign primers
3734448TCGGGC-TCGGGC-TCGGGC-TCGGGC-TCGGGC-TCGGGC-TCGGGC-TCGGGCDesign primers
4020520TCGGGAGCCTGCGTG-TCGGGAGCCTGCGTG-TCGGGAGCCTGCGTGDesign primers
4032958CGGCGGCAC-CGGCGGCAC-CGGCGGCACDesign primers
4229987CGGGTACGCCTGCGT-CGGGTACGCCTGCGT-CGGGTACGCCTGCGTDesign primers
4809204ACCACG-ACCACG-ACCACG-ACCACGDesign primers
4914169CGGCG-CGGCG-CGGCG-CGGCG-CGGCGDesign primers
4980492GGGGGCGGCCGGGGACTG-GGGGGCGGCCGGGGACTG-GGGGGCGGCCGGGGACTGDesign primers

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