Microsatellites /Tandem Repeats database

Genome: Rhodomicrobium equis 103S

Search your sequence for microsatellites
This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Info
Percentaje of mismatches allowed within the tandem repeats: 0 | 0.1 | 0.2
 
PositionSequence 
59273CGGTTCGAG-CGGTTCGAG-CGGTTCGAGDesign primers
270126AACACTGCCGCACCGAAC-AGCACTGCCGCACCGAAC-AGCACTGCCGCACCGAAC-AGCACTGCCGCACCGAACDesign primers
367191GACGGAGGTCACGGCAA-GACGGAGGTCACGGCAA-GACGGAGGTGACGGCAADesign primers
389045TCAGCCGGAACCACAGCG-GCAGCCGGAACCACAGCG-GCAGCCGGAACCACAGCGDesign primers
811552GCAGGT-GCAGGT-GCAGGT-GCAGGT-GCAGGTDesign primers
888453GCGTCTCGGGAGCCCACTGAG-TCGTCTCGGGAGCCCACTGAG-TCGTCTCGGGAGCTCACTGAGDesign primers
1444752GCCGAA-GCCGAA-GCCGAG-GCCGAA-GCCGAA-GCCGAA-GCCGAA-GCCGAADesign primers
1988694TTCGGTGTCGTGGTG-CTCGGTGTCGTGGTG-CTCGGTGTCGTGGTGDesign primers
2230240CGGATGC-CGGATGC-CGGATGC-CGGATGC-CGGATGCDesign primers
2779948CGTGCC-CGTGCC-CGTGCC-CGTGCCDesign primers
2780692GTACGAACATGTTCGGTACGGACATGTTCGTTACGAACATGTTCGDesign primers
2925525CCGCGG-CCGCGG-CCGCGG-CCGCGGDesign primers
3023442CTCCGGCTCCCGCACCCGAGCCCACCCCGGCTCCCGCACCCGAGCCCACCCCGGCTCCGGCACCCGAGCCCADesign primers
3190745CGGCGGCGACTTCGGCGGCGGGGACTTCGGCGGCGGCGACTTCGGCGGCGGGGACTTCGGCGGCGGGGACTTCGGDesign primers
3224084ACGAGGGCGGCGACGAGGCCGGCGACGAGGCCGGCGDesign primers
3734447ATCGGG-CTCGGG-CTCGGG-CTCGGG-CTCGGG-CTCGGG-CTCGGG-CTCGGGDesign primers
4020519CTCGGGAGCCTGCGT-GTCGGGAGCCTGCGT-GTCGGGAGCCTGCGTDesign primers
4032958CGGCGGCAC-CGGCGGCAC-CGGCGGCACDesign primers
4229984CGCCGGGTACGCCTGCGTCGGGTACGCCTGCGTCGGGTACGCCTGDesign primers
4809204ACCACG-ACCACG-ACCACG-ACCACGDesign primers
4914169CGGCG-CGGCG-CGGCG-CGGCG-CGGCGDesign primers
4980491AGGGGGCGGCCGGGGACT-GGGGGGCGGCCGGGGACT-GGGGGGCGGCCGGGGACTDesign primers

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