This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Percentaje of mismatches allowed within the tandem repeats:
0 |
0.1 |
0.2
| Position | Sequence | |
| 97507 | CTTG-CTTG-CTTG-CTTG-CTTG-CTTG-CTTG-CTTG-CTTG-CTTG-CTTG-CTTG-CTTG-CTTG-CTTG-CTTG-CTTG-CTTG-CTTG | Design primers |
| 97953 | AATC-AATC-AATC-AATC-AATC-AATC-AATC-AATC-AATC-AATC-AATC-AATC-AATC-AATC-AATC-AATC-AATC-AATC-AATC-AATC-AATC | Design primers |
| 168467 | CTGTT-CTGTT-CTGTT-CTGTT-CTGTT-CTGTT-CTGTT-CTGTT-CTGTT-CTGTT-CTGTT-CTGTT-CTGTT-CTGTT-CTGTT-CTGTT-CTGTT-CTGTT-CTGTT-CTGTT-CTGTT-CTGTT-CTGTT-CTGTT | Design primers |
| 196507 | ATTA-ATTA-ATTA-ATTA-ATTA-ATTA-ATTA-ATTA-ATTA | Design primers |
| 293269 | TTGC-TTGC-TTGC-TTGC-TTGC-TTGC-TTGC-TTGC-TTGC-TTGC-TTGC-TTGC-TTGC-TTGC-TTGC-TTGC-TTGC-TTGC-TTGC-TTGC-TTGC-TTGC-TTGC-TTGC | Design primers |
| 383531 | TTGC-TTGC-TTGC-TTGC-TTGC-TTGC-TTGC-TTGC-TTGC-TTGC-TTGC-TTGC-TTGC-TTGC-TTGC-TTGC-TTGC-TTGC-TTGC-TTGC-TTGC-TTGC-TTGC-TTGC-TTGC-TTGC-TTGC-TTGC-TTGC-TTGC-TTGC | Design primers |
| 423694 | TTTCTTTG-TTTCTTTG-TTTCTTTG | Design primers |
| 506335 | AACC-AACC-AACC-AACC-AACC-AACC-AACC-AACC-AACC-AACC | Design primers |
| 564933 | CCAA-CCAA-CCAA-CCAA-CCAA-CCAA-CCAA-CCAA-CCAA-CCAA-CCAA-CCAA-CCAA-CCAA-CCAA-CCAA-CCAA-CCAA-CCAA-CCAA-CCAA-CCAA-CCAA-CCAA | Design primers |
| 612146 | AACC-AACC-AACC-AACC-AACC-AACC-AACC-AACC-AACC-AACC-AACC-AACC-AACC | Design primers |
| 657082 | ATCA-ATCA-ATCA-ATCA-ATCA-ATCA-ATCA-ATCA-ATCA-ATCA-ATCA-ATCA-ATCA-ATCA | Design primers |
| 753935 | TGCT-TGCT-TGCT-TGCT-TGCT-TGCT-TGCT-TGCT-TGCT-TGCT-TGCT-TGCT-TGCT-TGCT-TGCT-TGCT-TGCT-TGCT-TGCT-TGCT | Design primers |
| 794356 | AGAAG-AGAAG-AGAAG-AGAAG-AGAAG-AGAAG-AGAAG-AGAAG-AGAAG-AGAAG-AGAAG-AGAAG-AGAAG-AGAAG | Design primers |
| 808789 | CTGGGTAATTA-CTGGGTAATTA-CTGGGTAATTA-CTGGGTAATTA | Design primers |
| 816478 | AGCA-AGCA-AGCA-AGCA-AGCA-AGCA-AGCA-AGCA-AGCA-AGCA-AGCA | Design primers |
| 826443 | AAGCTA-AAGCTA-AAGCTA-AAGCTA-AAGCTA | Design primers |
| 897412 | TCAA-TCAA-TCAA-TCAA-TCAA-TCAA-TCAA-TCAA-TCAA-TCAA-TCAA-TCAA-TCAA-TCAA-TCAA-TCAA-TCAA-TCAA-TCAA-TCAA-TCAA-TCAA | Design primers |
| 986668 | ATTGCC-ATTGCC-ATTGCC-ATTGCC-ATTGCC-ATTGCC-ATTGCC-ATTGCC | Design primers |
| 993925 | GACA-GACA-GACA-GACA-GACA-GACA-GACA-GACA-GACA-GACA-GACA-GACA-GACA-GACA-GACA-GACA-GACA-GACA-GACA-GACA-GACA-GACA-GACA-GACA | Design primers |
| 1029373 | ATCA-ATCA-ATCA-ATCA-ATCA-ATCA-ATCA-ATCA-ATCA-ATCA-ATCA-ATCA-ATCA-ATCA-ATCA-ATCA-ATCA-ATCA-ATCA-ATCA-ATCA-ATCA-ATCA-ATCA-ATCA-ATCA-ATCA-ATCA-ATCA-ATCA-ATCA-ATCA-ATCA | Design primers |
| 1044435 | AAACAAAG-AAACAAAG-AAACAAAG | Design primers |
| 1048600 | TAATTCA-TAATTCA-TAATTCA-TAATTCA-TAATTCA-TAATTCA | Design primers |
| 1053614 | TAAGCTCGCTGG-TAAGCTCGCTGG-TAAGCTCGCTGG | Design primers |
| 1181985 | AAGC-AAGC-AAGC-AAGC-AAGC-AAGC-AAGC-AAGC-AAGC-AAGC-AAGC-AAGC-AAGC-AAGC-AAGC-AAGC-AAGC-AAGC-AAGC-AAGC-AAGC-AAGC-AAGC | Design primers |
| 1219596 | GAGCTAGAAGCTTGTTGTGCG-GAGCTAGAAGCTTGTTGTGCG-GAGCTAGAAGCTTGTTGTGCG | Design primers |
| 1281688 | ATTATTTG-ATTATTTG-ATTATTTG-ATTATTTG-ATTATTTG-ATTATTTG | Design primers |
| 1388971 | AGGTAGTGAAAATTTTGCACT-AGGTAGTGAAAATTTTGCACT-AGGTAGTGAAAATTTTGCACT | Design primers |
| 1536931 | TTGA-TTGA-TTGA-TTGA-TTGA-TTGA-TTGA-TTGA-TTGA-TTGA-TTGA-TTGA-TTGA-TTGA-TTGA-TTGA | Design primers |
| 1581189 | GATGATGC-GATGATGC-GATGATGC-GATGATGC-GATGATGC-GATGATGC-GATGATGC-GATGATGC-GATGATGC-GATGATGC-GATGATGC-GATGATGC | Design primers |
| 1585150 | GTTT-GTTT-GTTT-GTTT-GTTT-GTTT-GTTT-GTTT-GTTT-GTTT-GTTT-GTTT-GTTT | Design primers |
| 1615980 | CAAT-CAAT-CAAT-CAAT-CAAT-CAAT-CAAT-CAAT-CAAT-CAAT-CAAT-CAAT-CAAT-CAAT-CAAT-CAAT-CAAT | Design primers |
| 1641675 | CAAT-CAAT-CAAT-CAAT-CAAT-CAAT-CAAT-CAAT-CAAT-CAAT-CAAT-CAAT-CAAT-CAAT-CAAT-CAAT | Design primers |
| 1816946 | AACA-AACA-AACA-AACA-AACA-AACA-AACA-AACA-AACA-AACA-AACA-AACA-AACA-AACA-AACA-AACA-AACA-AACA-AACA-AACA-AACA-AACA-AACA-AACA-AACA-AACA-AACA-AACA-AACA-AACA-AACA | Design primers |
| 1936004 | CAGC-CAGC-CAGC-CAGC-CAGC-CAGC-CAGC-CAGC-CAGC-CAGC-CAGC-CAGC-CAGC-CAGC-CAGC-CAGC-CAGC-CAGC | Design primers |
| 1952956 | GATGATGC-GATGATGC-GATGATGC-GATGATGC-GATGATGC-GATGATGC-GATGATGC-GATGATGC-GATGATGC-GATGATGC-GATGATGC-GATGATGC-GATGATGC | Design primers |
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