This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Percentaje of mismatches allowed within the tandem repeats:
0 |
0.1 |
0.2
| Position | Sequence | |
| 97503 | TTTA-CTTG-CTTG-CTTG-CTTG-CTTG-CTTG-CTTG-CTTG-CTTG-CTTG-CTTG-CTTG-CTTG-CTTG-CTTG-CTTG-CTTG-CTTG-CTTG | Design primers |
| 97951 | CAAA-TCAA-TCAA-TCAA-TCAA-TCAA-TCAA-TCAA-TCAA-TCAA-TCAA-TCAA-TCAA-TCAA-TCAA-TCAA-TCAA-TCAA-TCAA-TCAA | Design primers |
| 168460 | TTTTG-TCCTG-TTCTG-TTCTG-TTCTG-TTCTG-TTCTG-TTCTG-TTCTG-TTCTG-TTCTG-TTCTG-TTCTG-TTCTG-TTCTG-TTCTG-TTCTG-TTCTG-TTCTG-TTCTG-TTCTG-TTCTG-TTCTG-TTCTG | Design primers |
| 196503 | ATTG-ATTA-ATTA-ATTA-ATTA-ATTA-ATTA-ATTA-ATTA | Design primers |
| 293267 | CTTT-GCTT-GCTT-GCTT-GCTT-GCTT-GCTT-GCTT-GCTT-GCTT-GCTT-GCTT-GCTT-GCTT-GCTT-GCTT-GCTT-GCTT-GCTT-GCTT-GCTT-GCTT-GCTT-GCTT-GCTT | Design primers |
| 383528 | TCTT-TGCT-TGCT-TGCT-TGCT-TGCT-TGCT-TGCT-TGCT-TGCT-TGCT-TGCT-TGCT-TGCT-TGCT-TGCT-TGCT-TGCT-TGCT-TGCT-TGCT-TGCT-TGCT-TGCT-TGCT-TGCT-TGCT-TGCT-TGCT-TGCT | Design primers |
| 423694 | TTTCTTTG-TTTCTTTG-TTTCTTTG | Design primers |
| 506334 | GAAC-CAAC-CAAC-CAAC-CAAC-CAAC-CAAC-CAAC-CAAC | Design primers |
| 564931 | GCCC-AACC-AACC-AACC-AACC-AACC-AACC-AACC-AACC-AACC-AACC-AACC-AACC-AACC-AACC-AACC-AACC-AACC-AACC-AACC | Design primers |
| 612145 | GAAC-CAAC-CAAC-CAAC-CAAC-CAAC-CAAC-CAAC-CAAC-CAAC-CAAC-CAAC | Design primers |
| 657081 | TATC-AATC-AATC-AATC-AATC-AATC-AATC-AATC-AATC-AATC-AATC-AATC | Design primers |
| 753933 | TCTG-CTTG-CTTG-CTTG-CTTG-CTTG-CTTG-CTTG-CTTG-CTTG-CTTG-CTTG-CTTG-CTTG-CTTG-CTTG-CTTG-CTTG-CTTG-CTTG | Design primers |
| 794353 | AGCAG-AAGAG-AAGAG-AAGAG-AAGAG-AAGAG-AAGAG-AAGAG-AAGAG-AAGAG-AAGAG-AAGAG | Design primers |
| 808788 | TCTGGGTAATT-ACTGGGTAATT-ACTGGGTAATT-ACTGGGTAATT | Design primers |
| 816477 | CAGC-AAGC-AAGC-AAGC-AAGC-AAGC-AAGC-AAGC-AAGC | Design primers |
| 826439 | GCTGAA-GCTAAA-GCTAAA-GCTAAA-GCTAAA-GCTAAA | Design primers |
| 897410 | TGTC-AATC-AATC-AATC-AATC-AATC-AATC-AATC-AATC-AATC-AATC-AATC-AATC-AATC-AATC-AATC-AATC-AATC-AATC-AATC | Design primers |
| 986667 | TATTGC-CATTGC-CATTGC-CATTGC-CATTGC-CATTGC-CATTGC-CATTGC | Design primers |
| 993923 | ATGA-CAGA-CAGA-CAGA-CAGA-CAGA-CAGA-CAGA-CAGA-CAGA-CAGA-CAGA-CAGA-CAGA-CAGA-CAGA-CAGA-CAGA-CAGA-CAGA-CAGA-CAGA-CAGA-CAGA-CAGA | Design primers |
| 1029371 | ATAT-CAAT-CAAT-CAAT-CAAT-CAAT-CAAT-CAAT-CAAT-CAAT-CAAT-CAAT-CAAT-CAAT-CAAT-CAAT-CAAT-CAAT-CAAT-CAAT-CAAT-CAAT-CAAT-CAAT-CAAT-CAAT-CAAT-CAAT-CAAT-CAAT | Design primers |
| 1044435 | AAACAAAG-AAACAAAG-AAACAAAG | Design primers |
| 1048599 | TTAATTC-ATAATTC-ATAATTC-ATAATTC-ATAATTC-ATAATTC | Design primers |
| 1053613 | ATAAGCTCGCTG-GTAAGCTCGCTG-GTAAGCTCGCTG | Design primers |
| 1181983 | CGAA-GCAA-GCAA-GCAA-GCAA-GCAA-GCAA-GCAA-GCAA-GCAA-GCAA-GCAA-GCAA-GCAA-GCAA-GCAA-GCAA-GCAA-GCAA-GCAA | Design primers |
| 1217577 | GCAGAACTTGAAGCTTGTTGAGCAGAGCTTGAAGCTTGTTGTGCGGAGCTTGAAGCTTGTTGA | Design primers |
| 1218228 | GCAGAACTTGAAGCTTGTTGAGCAGAGCTTGAAGCTTGTTGTGCGGAGCTTGAAGCTTGTTGA | Design primers |
| 1218879 | GCAGAACTTGAAGCTTGTTGAGCAGAGCTTGAAGCTTGTTGTGCGGAGCTTGAAGCTTGTTGA | Design primers |
| 1219581 | GAAGCTTGTTGAGCCGAGCTA-GAAGCTTGTTGTGCGGAGCTA-GAAGCTTGTTGTGCGGAGCTA-GAAGCTTGTTGTGCGGAGCTA | Design primers |
| 1219782 | GCAGAACTTGAAGCTTGTTGAGCAGAGCTTGAAGCTTGTTGTGCGGAGCTTGAAGCTTGTTGA | Design primers |
| 1220358 | GAAGCTTGTTGAGCCGAGCTAGAAGCTTGTTGTGCGGAGCTAGAAGCTTGTTGCGCCGAGCTT | Design primers |
| 1220465 | TGCGGCGCTGGCGGATGTGGA-TGCGGCGCTGGCGGATGTGGA-TGCTGCACTGGCGGATGTGGA-TGCCGCACTGGCGGATGTGGA | Design primers |
| 1281686 | TCATTATT-TGATTATT-TGATTATT-TGATTATT-TGATTATT-TGATTATT | Design primers |
| 1388964 | TTGAACAAGGTAGTGAAAATTTTGCACTAGGTAGTGAAAATTTTGCACTAGGTAGTGAAAATT | Design primers |
| 1536929 | TTTT-GATT-GATT-GATT-GATT-GATT-GATT-GATT-GATT-GATT-GATT-GATT-GATT-GATT-GATT | Design primers |
| 1581187 | AAGATGAT-GCGATGAT-GCGATGAT-GCGATGAT-GCGATGAT-GCGATGAT-GCGATGAT-GCGATGAT-GCGATGAT-GCGATGAT-GCGATGAT-GCGATGAT | Design primers |
| 1585148 | TAGT-TTGT-TTGT-TTGT-TTGT-TTGT-TTGT-TTGT-TTGT-TTGT-TTGT-TTGT | Design primers |
| 1615977 | ATGC-AATC-AATC-AATC-AATC-AATC-AATC-AATC-AATC-AATC-AATC-AATC-AATC-AATC-AATC | Design primers |
| 1641672 | ATGC-AATC-AATC-AATC-AATC-AATC-AATC-AATC-AATC-AATC-AATC-AATC-AATC-AATC-AATC | Design primers |
| 1816944 | TGAA-CAAA-CAAA-CAAA-CAAA-CAAA-CAAA-CAAA-CAAA-CAAA-CAAA-CAAA-CAAA-CAAA-CAAA-CAAA-CAAA-CAAA-CAAA-CAAA-CAAA-CAAA-CAAA-CAAA-CAAA-CAAA-CAAA-CAAA-CAAA-CAAA | Design primers |
| 1936002 | AACA-GCCA-GCCA-GCCA-GCCA-GCCA-GCCA-GCCA-GCCA-GCCA-GCCA-GCCA-GCCA-GCCA-GCCA | Design primers |
| 1952954 | AAGATGAT-GCGATGAT-GCGATGAT-GCGATGAT-GCGATGAT-GCGATGAT-GCGATGAT-GCGATGAT-GCGATGAT-GCGATGAT-GCGATGAT-GCGATGAT | Design primers |
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