This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Percentaje of mismatches allowed within the tandem repeats:
0 |
0.1 |
0.2
| Position | Sequence | |
| 709063 | ATCAAAAGC-ATCAAAAGC-ATCAAAAGC | Design primers |
| 785854 | TTTACTA-AATACTA-AATACTA-AATACTA-AATACTA-AATACTA-AATACTA-AATACTA-AATACTA-AATACTA-AATACTA-AATACTA-AATACTA-AATACTA-AATACTA | Design primers |
| 1125899 | TTAAGCAATAA-CTAAGCAATAA-CTAAGCAATAA | Design primers |
| 1646296 | AAGAAGTAGTCA-AAAAAGTAGTCA-AAAAAGTAGTCA-AAAAAGTAGTCA | Design primers |
| 1832754 | GCACCAGAATCATCT-ACACCAGAATCATCT-ACACCAGAATCATCT-ACACCAGAATCATCT | Design primers |
| 1832844 | ACACCAGAATCATCA-GCACCAGAATCATCA-GCACCAGAATCATCA | Design primers |
| 1832934 | ACACCAGAATCATCTACACCAGAATCATCAGCACCAGAATCATCTACACCAGAATCATCTACACCAGAATCATCAGCACCAGAATCATCTACACCAGAATCATCAGCACCAGAATCATCTACACCAGAATCATCA | Design primers |
| 1833084 | GCACCAGAATCATCAGCACCAGAATCATCTACACCAGAATCATCAGCACCAGAATCATCAGCACCAGAATCATCTACACCAGAATCATCAGCACCAGAATCATCTACACCAGAATCATCAGCACCAGAATCATCT | Design primers |
| 1846073 | GTTTCAACAAGTAAAACAACTACTTCAACAAGTAAAACAACTGTTTCAACAAGTAAAACAACT | Design primers |
| 1870015 | TTCTTAAC-AACTTAAC-AACTTAAC-AACTTAAC-AACTTAAC-AACTTAAC-AACTTAAC-AACTTAAC-AACTTAAC-AACTTAAC-AACTTAAC-AACTTAAC-AACTTAAC-AACTTAAC-AACTTAAC-AACTTAAC-AACTTAAC-AACTTAAC-AACTTAAC-AACTTAAC-AACTTAAC-AACTTAAC-AACTTAAC-AACTTAAC | Design primers |
| 2284931 | GAGGAAGAAGAA-GAGGAAGAAGAA-GAAGAAGAAGAA | Design primers |
| 2510046 | TGCCAGGACCAT-CACCAGGACCAT-CACCAGGACCAT-CACCAGGACCAT-CACCAGGACCAT-CACCAGGACCAT-CACCAGGACCAT-CACCAGGACCAT | Design primers |
| 2538734 | TCTCCATTACCATTGTTTCCATTACCATTGTTTCCATTACCATTG | Design primers |
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