Microsatellites /Tandem Repeats database

Genome: Pyrococcus yayanosii CH1

Search your sequence for microsatellites
This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Info
Percentaje of mismatches allowed within the tandem repeats: 0 | 0.1 | 0.2
 
PositionSequence 
66960TGAGCT-TGAGCT-TGACCT-TGAGCTDesign primers
624233ATCGACATCGCCAACGACATCGTCDesign primers
695133ATT-GTT-TTT-GTT-ATT-ATT-TTT-GTTDesign primers
912297AAGAGGCAGAGGAAGAAGGAGAGGDesign primers
1093282TTCCTGAACAACTTCCTGAACTTCTTCCTCAGCAACDesign primers
1200393GTTGAGGTTCAGGCTGAGGTTCAGDesign primers
1217883AGAGGCAGAGAGGCAAAGAGGGAGDesign primers
1323934TTTGGTACGCTTTGGCAAGCCTTGGCACGCDesign primers
1543517CTTCCCTTTCTTCCCTCTCCTCCCTTTDesign primers
1623969GAGGAGGAGAAGAAGGAGGAAGAGGAGGAGDesign primers
1691914TCGTTGTCGTAGTCGTCGTAGTTGDesign primers

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