Microsatellites /Tandem Repeats database

Genome: Marinitoga piezophila KA3

Search your sequence for microsatellites
This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Info
Percentaje of mismatches allowed within the tandem repeats: 0 | 0.1 | 0.2
 
PositionSequence 
41107TTCAACAAGGAATTCAAGAAGGAATTCAAGAAGGAATTCAACAGGGAATTCAACAGGGAADesign primers
314542AACAGCATCGCAACAGCAACGCAACAGCAACGCDesign primers
686277AAGCATACTCACGCATACTCACGCATACTCDesign primers
974438TCCCTGTTCTAT-TCCCTGTTCTAT-TCCCTGCTCTATDesign primers
1309058AATCCTTGTTGT-AATCCTTGTTGT-AATCCTTGCTGTDesign primers
1575934TTG-TTG-TTG-TTG-TTG-TTG-TTG-TTGDesign primers
1682195TTG-TTG-TTG-TTG-TTG-TTG-TTG-TTG-TTG-TTG-TTGDesign primers
1741612GAGTATGCGT-GAGTATGCGT-AAGTATGCGTDesign primers
1863650TATT-TATT-TATT-TATT-TATT-TATT-TATTDesign primers
1979037GCATACTCGTGCATACTCATGCATACTCATDesign primers
2072832TCCGCCGGTTT-TCCGCCGGTTT-TCCGTCGGTTTDesign primers
2078507TCCGTCGGTTTTCCGCCGGTTTTCCGTCGGTTTTCTGTCGGTTTTCCGTCGGTTTDesign primers

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