Microsatellites /Tandem Repeats database

Genome: Corynebacterium diphtheriae 241

Search your sequence for microsatellites
This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Info
Percentaje of mismatches allowed within the tandem repeats: 0 | 0.1 | 0.2
 
PositionSequence 
12914AGGCGGATGTGGGCGGATATGGGTGGATGTDesign primers
86119TTGGCGCTGGCGTTGGCTATGGCGDesign primers
90963GGGATTGGTGGGCGTTGGTGGGCGTTGGTGDesign primers
102140CGCGCCCACC-AGCGCCCACC-AGTGCCCACCDesign primers
192698GAGCCGAAGCCGGAACCGAAGCCGDesign primers
193028CCGGAGCCTAAGCCGGAGCCCAAGCCCGAGCCCAAGDesign primers
232190GAGTAACTTAGTAACTCAGTAACTTAGTAACTDesign primers
265669CCACGATCCCGCGATCCCGCGATCDesign primers
274300TAGCGAACAGAAAGCGAACAAATAGCGAACAGADesign primers
281774GGTCACCAAC-GCCCACCAAC-GCCCACCAAC-GCCCACCAACDesign primers
357333GTTGCTGCTGCAGGTGCTGCTCCAGCTGCTGCTGAADesign primers
532155CTGGAAGGCATGGAAGGCGTGGAAGGCDesign primers
568698TCACAGCC-ACACAGCC-ACACAGCC-ACACAGCC-ACACAGCCDesign primers
568879CGCGGCTATCGCGGTTATCGCGGTTATDesign primers
812693GTGGCGGTGGTGATGGCGGTGGTGDesign primers
926716CTTGGTTGGCGTTGGTGGGCGTTGGTGGGCDesign primers
931290CGA-CGA-CGA-TGA-CGA-AGA-CGA-GGADesign primers
969902AACCGTCGTAATCGTCGTAACCGTCGTDesign primers
1449116GGCGGCGGCTGCGGCGGTGGCGGCGGCTGCGGTGGCDesign primers
1487395GCTGCTGGCTTAGGCGCAGCTGGTTTAGGAGCCGCAGGCTTAGCCDesign primers
1586743CCACACAGAGGCCACAAAGGGGCCACACAAAGGDesign primers
1797576CAGGCGCAGGGGCAGGCGCAGGCGDesign primers
1912162CTGCGC-CTGCGC-CAGCGC-CTGAGCDesign primers
1934866TTGTGGAATA-ACGTGGAATA-ACGTGGAATADesign primers
1945989GCGCACACCA-ACGCCCACCA-ACGCCCACCA-GCGCACACCA-ACGCACACCADesign primers
1980843CGACTCTGTCGACTCTGCCGACTCGGTCGACTCTGGDesign primers
1992800ACGCCCACCAGCACCCACCAACGCCCACCADesign primers
2063404TGGTTTCCC-CGGTTTCCC-CGGTTTCCCDesign primers
2113011CCAGTAAAGCCGAGTAATGCCGAGTAATGCDesign primers
2159774CGCGGCAGTACCACCAGCAGCAGTACCTCCTGCGGCAGCACCTCCDesign primers
2205144CGCCCACCAA-CGCCCACCAA-CGCCAGCCAADesign primers
2286509CTTCGGCTGCGGCTGCGGCTTGGGDesign primers
2322188GCAGCCGAAGCCACAGCCGCTGCCDesign primers
2361908GCTCACGCACC-CCTCACGCACC-CCTCACGCATCDesign primers
2383040GCGGGTGCTGCTGGTGCTGCGGGTGCTDesign primers
2392429TGTATCGCGCTAG-GCTATCGCGCTAG-GCTATCGCGCTAGDesign primers

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