Microsatellites /Tandem Repeats database

Genome: Corynebacterium diphtheriae VA01

Search your sequence for microsatellites
This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Info
Percentaje of mismatches allowed within the tandem repeats: 0 | 0.1 | 0.2
 
PositionSequence 
12884AGGCGGATGTGGGCGGATATGGGTGGATGTDesign primers
63557TTGGCGCTGGCGTTGGCTATGGCGDesign primers
81016AGTTGTTTCGAGTTGTTTTAAGTTGTTGGGDesign primers
82090GTAGTTGTTTTAAGTTGTTTCGAGTTGTTTDesign primers
207436GAGTAACTTAGTAACTCAGTAACTTAGTAACTDesign primers
240918CCACGATC-CCGCGATC-CCGCGATC-CCACGATCDesign primers
342975GTTGCTGCTGCAGGTGCTGCTCCAGCTGCTGCTGAADesign primers
510934CTGGAAGGC-ATGGAAGGC-ATGGAAGGCDesign primers
545215ACGATCTACACGATCTTCACGATCTTCDesign primers
570382CCCACCAGTG-CCCACCAGTG-CCCACCAACGDesign primers
682571TGTTGTGGTTGTTGTGTTTGTTGTTGTDesign primers
758207CGGAAGAAGCGGAAGAATTGGAAGAAGDesign primers
805359GTGGCGGTGGTGATGGCGGTGGTGDesign primers
919079CTTGGTTGGCGTTGGTGGGCGTTGGTGGGCDesign primers
962281AACCGTCGTAATCGTCGTAACCGTCGTDesign primers
1110761TGTTGTGGTTGTTGTGTTTGTTGTTGTDesign primers
1416753GGCGGCGGCTGCGGCGGTGGCGGCGGCTGCGGTGGCDesign primers
1454796GTGCTGCTGGCTTAGGCGCAGCTGGTTTAGGAGCCGCAGGCTTAGDesign primers
1749876CAGGCGCAGGGGCAGGCGCAGGCGDesign primers
1863068AACAACAACAAACACAACAACCACAACAGCDesign primers
1894666TGTGGAATAACGTGAAATAACGTGGAATAADesign primers
1941007GTCGACTCTGGCGACTCTGTCGACTCGDesign primers
1956563CGCGCCCACCAGCACCCACCAGCGCCCACCDesign primers
2016960CTCGCCCACC-AGCGCCCACC-AGCGCCCACCDesign primers
2070176GGCGCTGGTGGGCGTTGATGGGTGCTGGTGDesign primers
2070564CCAGTAAAGCCGAGTAATGCCGAGTAATGCDesign primers
2099592AACAACAACAAACACAACAACCACAACAGCDesign primers
2109285CGCGGCAGTACCACCAGCAGCAGTACCTCCTGCGGCAGTACCTCCDesign primers
2243038CTTCGGCTGCGGCTGCGGCTTGGGDesign primers
2273048AACAACAACAAACACAACAACCACAACAGCDesign primers
2324881CTCTCATCGCGTTTCATCGCATCCCATCGCDesign primers
2351912GGT-GCT-GCT-GGT-CCT-GCT-GGT-GCT-GCT-GGT-GCT-GCTDesign primers

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