Microsatellites /Tandem Repeats database

Genome: Mycobacterium bovis BCG str. Mexico

Search your sequence for microsatellites
This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Info
Percentaje of mismatches allowed within the tandem repeats: 0 | 0.1 | 0.2
 
PositionSequence 
79533CGGTGGACC-CGGTGGACC-CGGTGGACC-CGGTGGACC-CGGTGGACC-CGGTGGACC-CGGTGGACC-CGGTGGACC-CGGTGGACC-CGGTGGACCDesign primers
241702CCGTCGCAAAC-CCGTCGCAAAC-CCGTCGCAAACDesign primers
333352GCGCCGCCG-GCGCCGCCG-GCGCCGCCGDesign primers
333670CCGCCGGCC-CCGCCGGCC-CCGCCGGCCDesign primers
334959CCGCCGTTG-CCGCCGTTG-CCGCCGTTGDesign primers
336973CGCCGCCGG-CGCCGCCGG-CGCCGCCGGDesign primers
337905CCGCCGTTG-CCGCCGTTG-CCGCCGTTGDesign primers
337948TGCCGCCGG-TGCCGCCGG-TGCCGCCGGDesign primers
428472TGCCGAGGTTTGCAC-TGCCGAGGTTTGCAC-TGCCGAGGTTTGCACDesign primers
473860TTGTGGGCC-TTGTGGGCC-TTGTGGGCC-TTGTGGGCCDesign primers
673737CCGGTGCCG-CCGGTGCCG-CCGGTGCCGDesign primers
674366GCCGTTGCC-GCCGTTGCC-GCCGTTGCCDesign primers
674425CGCCGTTGC-CGCCGTTGC-CGCCGTTGCDesign primers
674539CGTTGCCGC-CGTTGCCGC-CGTTGCCGCDesign primers
841504CGGCAACGG-CGGCAACGG-CGGCAACGGDesign primers
841891CGGCGGGGC-CGGCGGGGC-CGGCGGGGCDesign primers
842782CGGCAACGG-CGGCAACGG-CGGCAACGGDesign primers
928208CGGCGGGGC-CGGCGGGGC-CGGCGGGGCDesign primers
1113690CGAATA-CGAATA-CGAATA-CGAATADesign primers
1122431GGGATGCCGATGCCC-GGGATGCCGATGCCC-GGGATGCCGATGCCCDesign primers
1189282TTGCCGCCG-TTGCCGCCG-TTGCCGCCGDesign primers
1189336TTGCCGCCG-TTGCCGCCG-TTGCCGCCGDesign primers
1190138CGGTGCCGC-CGGTGCCGC-CGGTGCCGCDesign primers
1214220GCCGGTGGC-GCCGGTGGC-GCCGGTGGCDesign primers
1339818CGGCGA-CGGCGA-CGGCGA-CGGCGADesign primers
1613492CGCCGTTGC-CGCCGTTGC-CGCCGTTGCDesign primers
1626130GCCGCCGGT-GCCGCCGGT-GCCGCCGGT-GCCGCCGGTDesign primers
1629220CCCGCCGGG-CCCGCCGGG-CCCGCCGGGDesign primers
1632819CCCGCCGGG-CCCGCCGGG-CCCGCCGGGDesign primers
1970826CCG-CCG-GCG-CCG-CCG-GCG-CCG-CCG-GCGDesign primers
1971242CCCGCCGGC-CCCGCCGGC-CCCGCCGGCDesign primers
1971980GCCGCCGTT-GCCGCCGTT-GCCGCCGTTDesign primers
1972022CGCCCCACC-CGCCCCACC-CGCCCCACCDesign primers
2068939CCGCCGTTG-CCGCCGTTG-CCGCCGTTGDesign primers
2069409CCGCCGTTG-CCGCCGTTG-CCGCCGTTGDesign primers
2560616CAGTGCCAA-CAGTGCCAA-CAGTGCCAADesign primers
2887522CCGCCGTTT-CCGCCGTTT-CCGCCGTTTDesign primers
3704207CCGCCGTCA-CCGCCGTCA-CCGCCGTCADesign primers
3705733GTTGCCGCC-GTTGCCGCC-GTTGCCGCCDesign primers
3706752CGTTGCCGC-CGTTGCCGC-CGTTGCCGCDesign primers
3746596CGGTGGCAA-CGGTGGCAA-CGGTGGCAADesign primers
3746828GGCAACGGC-GGCAACGGC-GGCAACGGCDesign primers
3886979CCGGCGGGG-CCGGCGGGG-CCGGCGGGG-CCGGCGGGGDesign primers
3887053AACGGCGGC-AACGGCGGC-AACGGCGGC-AACGGCGGCDesign primers
3895631CGGCGGGAC-CGGCGGGAC-CGGCGGGACDesign primers
3900641GGCAACGGC-GGCAACGGC-GGCAACGGCDesign primers
3900986GGCAACGGC-GGCAACGGC-GGCAACGGCDesign primers
3901331GGCAACGGC-GGCAACGGC-GGCAACGGCDesign primers
3901676GGCAACGGC-GGCAACGGC-GGCAACGGCDesign primers
3903637CGGCAACGG-CGGCAACGG-CGGCAACGGDesign primers
3907435GCCGGCGGG-GCCGGCGGG-GCCGGCGGGDesign primers
3908070CGGCGGCAC-CGGCGGCAC-CGGCGGCAC-CGGCGGCACDesign primers
3908357ACGGTGGTA-ACGGTGGTA-ACGGTGGTADesign primers
3995178GCCGCCCGC-GCCGCCCGC-GCCGCCCGCDesign primers
4046645CGCCGGCGG-CGCCGGCGG-CGCCGGCGGDesign primers
4046732CGGCGCCGG-CGGCGCCGG-CGGCGCCGGDesign primers
4113477ACCCGGCAT-ACCCGGCAT-ACCCGGCATDesign primers
4121378CGCGGACGGGAA-CGCGGACGGGAA-CGCGGACGGGAADesign primers

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