Microsatellites /Tandem Repeats database

Genome: Leuconostoc mesenteroides subsp. mesenteroides J18

Search your sequence for microsatellites
This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Info
Percentaje of mismatches allowed within the tandem repeats: 0 | 0.1 | 0.2
 
PositionSequence 
223647CAGCAGCAGCACCAGTAGCAGCTGDesign primers
715777TGCAGCTGAAGCTGCTGCTGCAGADesign primers
855255ATTGTAGGTGCCATTATTGGTGCCATTGCAGGTGCTDesign primers
973727CTTTTTTATTTTTTTATTTTTTTATTTTTTTATTTTTTTADesign primers
1043505AATCAAGCT-CATCAAGCT-CATCAAGCTDesign primers
1045033GACAAAGCCAAGTACGATAAAGACAAAGCCCAATATGACAAAGACAAGGCCCAGTATGATAAGDesign primers
1059344TTGGAA-TTTGAA-TTTGAA-TTTGAA-TTTGAADesign primers
1141693TTCTTCTTC-AAGTTCTTC-AAGTTCTTC-AAGTTCTTC-AAGTTCTTC-AAGTTCTTCDesign primers
1194045ACACCAATACCAAAACCAACACCTDesign primers
1319850CCATAGCCGTAGCCGTAGCCATAGCCATAADesign primers
1398119GCAAAAATAGCAATAATAGCAACAATADesign primers
1428942TT-GA-TT-TT-TT-TT-TG-AC-TT-TT-GT-TT-GT-TT-TT-TT-TDesign primers
1460669CAGTTG-TTTCTG-TTTCTG-TTTCTG-TTTCTG-TTTCTG-TTTCTG-TTTCTG-TTTCTG-TTTCTG-TTTCTG-TTTCTG-TTTCTG-TTTCTG-TTTCTG-TTTCTG-TTTCTG-TTTCTG-TTTCTG-TTTCTG-TTTCTG-TTTCTG-TTTCTG-TTTCTGDesign primers
1570104ATAAAATAATAAAAAAATAAAATADesign primers
1792064TTGAATAGCTTGAATATCTTCAATAGCDesign primers

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