This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Percentaje of mismatches allowed within the tandem repeats:
0 |
0.1 |
0.2
| Position | Sequence | |
| 282276 | ACTTACCAGCGA-GCTTACCAGCGA-GCTTACCAGCGA-GCTTACCAGCGA | Design primers |
| 294682 | AATTAA-AATTAA-AATTAA-AATTAA | Design primers |
| 338922 | ATTG-TCTG-TCTG-TCTG-TCTG-TCTG-TCTG-TCTG-TCTG-TCTG-TCTG-TCTG-TCTG-TCTG-TCTG | Design primers |
| 371865 | CCG-TCG-TCA-TCG-TCA-TCG-TCA-TCG-TCA-TCG-TCA-TCG-TCA-TCG-TCA-TCG-TCA-TCG-TCA-TCG-TCA-TCG-TCA-TCG | Design primers |
| 475491 | CTTT-GATT-GATT-GATT-GATT-GATT-GATT-GATT-GATT-GATT-GATT-GATT-GATT-GATT-GATT-GATT-GATT-GATT-GATT-GATT-GATT-GATT-GATT-GATT-GATT-GATT-GATT-GATT-GATT-GATT-GATT-GATT-GATT-GATT-GATT | Design primers |
| 561908 | TAATCGTCTT-TAATTGTCTT-TAATTGTCTT-TAATTGTCTT-TAATTGTCTT | Design primers |
| 657411 | AATTTAGGTTCAAATTTAGGCTCAAATTTAGGCTCA | Design primers |
| 680438 | AGTT-TGAT-TGAT-TGAT-TGAT-TGAT-TGAT-TGAT-TGAT-TGAT-TGAT-TGAT-TGAT-TGAT-TGAT-TGAT-TGAT-TGAT-TGAT-TGAT | Design primers |
| 808837 | CTTG-GTTG-GTTG-GTTG-GTTG-GTTG-GTTG-GTTG-GTTG | Design primers |
| 867006 | TTTT-GGTT-GGTT-GGTT-GGTT-GGTT-GGTT-GGTT-GGTT-GGTT-GGTT-GGTT-GGTT-GGTT-GGTT-GGTT-GGTT-GGTT-GGTT-GGTT-GGTT-GGTT-GGTT-GGTT-GGTT-GGTT-GGTT-GGTT-GGTT-GGTT | Design primers |
| 879056 | TTTAAT-TTTAAT-TTTAAT-TTTAAT | Design primers |
| 922748 | TGGC-AAGC-AAGC-AAGC-AAGC-AAGC-AAGC-AAGC-AAGC-AAGC-AAGC-AAGC-AAGC-AAGC-AAGC-AAGC-AAGC-AAGC-AAGC-AAGC-AAGC-AAGC-AAGC-AAGC-AAGC | Design primers |
| 1167531 | TCTTTG-TCTTTG-TCTTTG-TCTTTG | Design primers |
| 1167835 | TGGTTGTTGCATCGGTTGTTGCATTGGCTGTTGCAT | Design primers |
| 1347925 | TTTTTC-CTTTTC-CTTTTC-CTTTTC-CTTTTC-CTTTTC-CTTTTC-CTTTTC | Design primers |
| 1628144 | AACC-GACC-AACC-AACC-AACC-AACC-AACC-AACC-AACC | Design primers |
| 1709953 | ATTG-CTTG-CTTG-CTTG-CTTG-CTTG-CTTG-CTTG-CTTG-CTTG-CTTG-CTTG | Design primers |
| 1740721 | ATGC-AATC-AATC-AATC-AATC-AATC-AATC-AATC-AATC-AATC-AATC-AATC-AATC-AATC-AATC-AATC-AATC-AATC-AATC-AATC-AATC-AATC-AATC-AATC-AATC-AATC-AATC-AATC-AATC-AATC-AATC-AATC-AATC-AATC-AATC-AATC-AATC-AATC-AATC-AATC-AATC-AATC-AATC-AATC-AATC | Design primers |
| 1862247 | ACAAATAA-TCAAATAA-TCAAATAA-TCAAATAA-TCAAATAA-TCAAATAA | Design primers |
| 1960234 | CA-AA-AA-AA-AA-AA-AA-AA-AA-AA-AA-AA-AA-AA-AA | Design primers |
| 1971514 | AATTAA-AATTAA-AATTAA-AATTAA | Design primers |
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