Microsatellites /Tandem Repeats database

Genome: Vibrio cholerae IEC224

Search your sequence for microsatellites

This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Info

Percentaje of mismatches allowed within the tandem repeats: 0 | 0.1 | 0.2
 
PositionSequence 
137104TAACAG-AAACAG-AAACAG-AAACAG-AAACAG-AAACAG-AAACAG-AAACAG-AAACAG-AAACAGDesign primers
467119TCGACCC-TAGACCC-TAGACCC-TAGACCC-TAGACCC-TAGACCCDesign primers
532259TTGTCGA-TTGTCGA-TTGTCGA-TTGTCGADesign primers
1248914TGCTGTTTATTGTTTGA-AGCTGTTTATTGTTTGA-AGCTGTTTATTGTTTGADesign primers
1565217AAATCAA-AAATCAA-AAATCAA-AAATCAADesign primers
1824821CGATAATCC-AGATAATCC-AGATAATCC-AGATAATCC-AGATAATCC-AGATAATCCDesign primers
1870984AGATGACT-AGATGACT-AGATGACTDesign primers

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