Microsatellites /Tandem Repeats database

Genome: Acetobacter pasteurianus IFO 3283-07

Search your sequence for microsatellites
This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Info
Percentaje of mismatches allowed within the tandem repeats: 0 | 0.1 | 0.2
 
PositionSequence 
283561GCTGGC-CTGTGC-CTGTGC-CTGTGC-CTGTGC-CTGTGC-CTGTGC-CTGTGC-CTGTGC-CTGTGC-CTGTGC-CTGTGCDesign primers
315395CGCAGC-CGCAGC-CGCAAC-CGCAGCDesign primers
474328TGCGGCGGCGGCTGGGGCTGCGGTDesign primers
527427AGAAGCAGAGGCAGAAACAGAGGCAGAAGCDesign primers
559555TCCGGTTTTGCGGTTTTCTGGTTTDesign primers
565344GGTGCGGCGTATCCCGGTGCGGCATAACCGGGGGCAGCGTAGCCCDesign primers
566351GGTGGCGAACATGGTGGCCCCGGTGGCGAACATGGCGGCCCGGGTGGTGAACACGGTGGCGACDesign primers
666319GGTGGTGCTCCACGTGGTGGCGCACCTCGTGGGGGTGCTCCCGGTDesign primers
888115CGGTAACACCAGTAACACCGATAACACDesign primers
1841235TGCTGT-TGGCTC-TGGCTC-TGGCTC-TGGCTC-TGGCTC-TGGCTC-TGGCTC-TGGCTC-TGGCTC-TGGCTC-TGGCTC-TGGCTC-TGGCTC-TGGCTC-TGGCTC-TGGCTC-TGGCTC-TGGCTC-TGGCTCDesign primers
1996274AAAGCCTTAGAGCCTTAGAGCCTTDesign primers
2038703TACGA-AGAGG-ACAGG-ACAGG-ACAGG-ACAGG-ACAGG-ACAGG-ACAGG-ACAGG-ACAGG-ACAGG-ACAGG-ACAGG-ACAGG-ACAGG-ACAGG-ACAGG-ACAGG-ACAGG-ACAGG-ACAGG-ACAGG-ACAGG-ACAGG-ACAGG-ACAGG-ACAGG-ACAGG-ACAGG-ACAGG-ACAGG-ACAGG-ACAGG-ACAGGDesign primers
2151159ACCCGCACCTGCACCTGCACCTGCACCTGCACCCGTDesign primers
2209693AGCAAGGTC-GATAAGGTC-GATAAGGTC-GATAAGGTC-GATAAGGTC-GATAAGGTC-GATAAGGTC-GATAAGGTCDesign primers
2215976TTAAGAGAATATAAAAGAATATAAGAGATTDesign primers
2469481GGTGTAACAAGTGTAACAGGTGTAACADesign primers
2474547GATGTTTTCAGGTCTTTTCAGAACTTTTCADesign primers
2486927TTTGCGCCTTTTTGCGCTTCCTTGCGTCTTDesign primers

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