Microsatellites /Tandem Repeats database

Genome: Acetobacter pasteurianus IFO 3283-26

Search your sequence for microsatellites
This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Info
Percentaje of mismatches allowed within the tandem repeats: 0 | 0.1 | 0.2
 
PositionSequence 
283561GCTGGC-CTGTGC-CTGTGC-CTGTGC-CTGTGC-CTGTGC-CTGTGC-CTGTGC-CTGTGC-CTGTGC-CTGTGC-CTGTGCDesign primers
315395CGCAGC-CGCAGC-CGCAAC-CGCAGCDesign primers
474328TGCGGCGGCGGCTGGGGCTGCGGTDesign primers
527427AGAAGCAGAGGCAGAAACAGAGGCAGAAGCDesign primers
559555TCCGGTTTTGCGGTTTTCTGGTTTDesign primers
565344GGTGCGGCGTATCCCGGTGCGGCATAACCGGGGGCAGCGTAGCCCDesign primers
566351GGTGGCGAACATGGTGGCCCCGGTGGCGAACATGGCGGCCCGGGTGGTGAACACGGTGGCGACDesign primers
666319GGTGGTGCTCCACGTGGTGGCGCACCTCGTGGGGGTGCTCCCGGTDesign primers
888115CGGTAACACCAGTAACACCGATAACACDesign primers
1842252TGCTGT-TGGCTC-TGGCTC-TGGCTC-TGGCTC-TGGCTC-TGGCTC-TGGCTC-TGGCTC-TGGCTC-TGGCTC-TGGCTC-TGGCTC-TGGCTC-TGGCTC-TGGCTC-TGGCTC-TGGCTC-TGGCTC-TGGCTCDesign primers
1998954AAAGCCTTAGAGCCTTAGAGCCTTDesign primers
2041383TACGA-AGAGG-ACAGG-ACAGG-ACAGG-ACAGG-ACAGG-ACAGG-ACAGG-ACAGG-ACAGG-ACAGG-ACAGG-ACAGG-ACAGG-ACAGG-ACAGG-ACAGG-ACAGG-ACAGG-ACAGG-ACAGG-ACAGG-ACAGG-ACAGG-ACAGG-ACAGG-ACAGG-ACAGG-ACAGG-ACAGG-ACAGG-ACAGG-ACAGG-ACAGGDesign primers
2153839ACCCGCACCTGCACCTGCACCTGCACCTGCACCCGTDesign primers
2212373AGCAAGGTC-GATAAGGTC-GATAAGGTC-GATAAGGTC-GATAAGGTC-GATAAGGTC-GATAAGGTC-GATAAGGTCDesign primers
2218656TTAAGAGAATATAAAAGAATATAAGAGATTDesign primers
2472161GGTGTAACAAGTGTAACAGGTGTAACADesign primers
2477227GATGTTTTCAGGTCTTTTCAGAACTTTTCADesign primers
2489607TTTGCGCCTTTTTGCGCTTCCTTGCGTCTTDesign primers

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