Microsatellites /Tandem Repeats database

Genome: Bacillus thuringiensis serovar chinensis CT-43

Search your sequence for microsatellites
This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Info
Percentaje of mismatches allowed within the tandem repeats: 0 | 0.1 | 0.2
 
PositionSequence 
460531TATTTT-TATTTT-TATTTT-TATTTT-TATTTTDesign primers
924480GAAAAACCAGGTGAAGGAACA-GAAAAACCAGGTGAAGGAACA-GAAAAACCAGGTGAAGGAACA-GAAAAACCAGGTGAAGGAACA-GAAAAACCAGGTGAAGGAACA-GAAAAACCAGGTGAAGGAACA-GAAAAACCAGGTGAAGGAACADesign primers
983099ACAGAG-ACAGAG-ACAGAG-ACAGAGDesign primers
1225834CCAGTCGGT-CCAGTCGGT-CCAGTCGGTDesign primers
1234088AGAACAGCC-AGAACAGCC-AGAACAGCC-AGAACAGCCDesign primers
1283658AAGAAAGTAGAAGAACAG-AAGAAAGTAGAAGAACAG-AAGAAAGTAGAAGAACAGDesign primers
1530590TCATGGACA-TCATGGACA-TCATGGACADesign primers
1934017AATAAC-AATAAC-AATAAC-AATAACDesign primers
2143749AGGAACTGGAACAGG-AGGAACTGGAACAGG-AGGAACTGGAACAGG-AGGAACTGGAACAGGDesign primers
2371856AACAGGAGC-AACAGGAGC-AACAGGAGC-AACAGGAGC-AACAGGAGC-AACAGGAGCDesign primers
2372243AACGGGAGT-AACGGGAGT-AACGGGAGTDesign primers
2372328GGAGTAACG-GGAGTAACG-GGAGTAACGDesign primers
2374018ACAGGTCCA-ACAGGTCCA-ACAGGTCCA-ACAGGTCCA-ACAGGTCCA-ACAGGTCCADesign primers
2374200AACAGGAGC-AACAGGAGC-AACAGGAGC-AACAGGAGC-AACAGGAGCDesign primers
2374289CAACAGGTC-CAACAGGTC-CAACAGGTCDesign primers
2638701GGAGTAACGGGTCCAACA-GGAGTAACGGGTCCAACA-GGAGTAACGGGTCCAACA-GGAGTAACGGGTCCAACADesign primers
3246863GGTACTGGT-GGTACTGGT-GGTACTGGTDesign primers
3773986GACCTGTTG-GACCTGTTG-GACCTGTTG-GACCTGTTG-GACCTGTTG-GACCTGTTG-GACCTGTTGDesign primers
4894192TCTTTCGGT-TCTTTCGGT-TCTTTCGGT-TCTTTCGGT-TCTTTCGGTDesign primers

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