Microsatellites /Tandem Repeats database

Genome: Chlamydophila psittaci 01DC11

Search your sequence for microsatellites
This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Info
Percentaje of mismatches allowed within the tandem repeats: 0 | 0.1 | 0.2
 
PositionSequence 
75876GCTTTAGCTTCAGCTATAGGTTTADesign primers
222560CAGGAG-CAGGAG-AAGGAG-GAGGAG-TAGGAGDesign primers
226760TTTTATTTTTTATTATTTAATTTCADesign primers
466975CCTCCTGCTCCTCCTTCTCCTCCADesign primers
467904TGGTGGTGGTGCAGGTGGTGGTGGDesign primers
544039TAAATCTATACATCTATAATTCTADesign primers
635076GTTCTTGTGCTTGTTCTTGTTCTCDesign primers
802246CAGCAGCACCAGCACCAGCAGCAADesign primers
951913CAACA-AAAGA-ACAAA-ACAAC-AAAADesign primers
1078894CTTTAGGTTTAGCTTTTGCTTTAGDesign primers

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