This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Percentaje of mismatches allowed within the tandem repeats:
0 |
0.1 |
0.2
| Position | Sequence | |
| 81987 | ATAAATAT-ATAAATAT-ATAAATAT-ATAAATAT-ATAAATAT | Design primers |
| 141554 | TTATTTAATC-TTATTTAATC-TTATTTAATC-TTATTTAATC-TTATTTAATC-TTATTTAATC | Design primers |
| 141624 | TTATTTAATC-TTATTTAATC-TTATTTAATC-TTATTTAATC-TTATTTAATC | Design primers |
| 144226 | TTTTTTAAACTCTCT-TTTTTTAAACTCTCT-TTTTTTAAACTCTCT | Design primers |
| 144302 | TTTTTGAACTCTTTC-TTTTTGAACTCTTTC-TTTTTGAACTCTTTC | Design primers |
| 252616 | TTAATGT-TTAATGT-TTAATGT-TTAATGT | Design primers |
| 372714 | TGATTGAA-TGATTGAA-TGATTGAA | Design primers |
| 476112 | TTTTTAAACCTTTCTTTT-TTTTTAAACCTTTCTTTT-TTTTTAAACCTTTCTTTT | Design primers |
| 522849 | CACAGAATTAAA-CACAGAATTAAA-CACAGAATTAAA-CACAGAATTAAA | Design primers |
| 560097 | AATTTTAAGAT-AATTTTAAGAT-AATTTTAAGAT | Design primers |
| 711004 | TTCTTTATTCTTTAA-TTCTTTATTCTTTAA-TTCTTTATTCTTTAA | Design primers |
| 721486 | ATGATGATTTGAGAGTTAATT-ATGATGATTTGAGAGTTAATT-ATGATGATTTGAGAGTTAATT-ATGATGATTTGAGAGTTAATT-ATGATGATTTGAGAGTTAATT | Design primers |
| 753031 | TCGTATTTTCCTGTGAGATCA-TCGTATTTTCCTGTGAGATCA-TCGTATTTTCCTGTGAGATCA-TCGTATTTTCCTGTGAGATCA-TCGTATTTTCCTGTGAGATCA-TCGTATTTTCCTGTGAGATCA-TCGTATTTTCCTGTGAGATCA-TCGTATTTTCCTGTGAGATCA | Design primers |
| 772188 | TCATTTTAAATCCTT-TCATTTTAAATCCTT-TCATTTTAAATCCTT-TCATTTTAAATCCTT | Design primers |
| 992864 | GTGTGATATAGAGATA-GTGTGATATAGAGATA-GTGTGATATAGAGATA-GTGTGATATAGAGATA-GTGTGATATAGAGATA-GTGTGATATAGAGATA | Design primers |
| 1355299 | GAATAAAA-GAATAAAA-GAATAAAA-GAATAAAA-GAATAAAA-GAATAAAA-GAATAAAA-GAATAAAA-GAATAAAA-GAATAAAA-GAATAAAA-GAATAAAA-GAATAAAA-GAATAAAA-GAATAAAA-GAATAAAA-GAATAAAA-GAATAAAA-GAATAAAA-GAATAAAA-GAATAAAA-GAATAAAA-GAATAAAA | Design primers |
| 1359963 | CATTCAAT-CATTCAAT-CATTCAAT | Design primers |
| 1399001 | AAACCC-AAACCC-AAACCC-AAACCC-AAACCC | Design primers |
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