Microsatellites /Tandem Repeats database

Genome: Helicobacter pylori 83

Search your sequence for microsatellites

This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Info

Percentaje of mismatches allowed within the tandem repeats: 0 | 0.1 | 0.2
 
PositionSequence 
165137AAATCTTTCTGTTCTTTAACC-AAATCTTTCTGTTCTTTAACC-AAATCTTTCTGTTCTTTAACCDesign primers
165279TTTGTTTTTCTTGTTCTGTCT-TTTGTTTTTCTTGTTCTGTCT-TTTGTTTTTCTTGTTCTGTCT-TTTGTTTTTCTTGTTCTGTCTDesign primers
209738TTTCTTCTGTGA-TTTCTTCTGTGA-TTTCTTCTGTGA-TTTCTTCTGTGA-TTTCTTCTGTGADesign primers
272916GTTTGGTTG-GTTTGGTTG-GTTTGGTTGDesign primers
369799TTCTTTAACCTCTTCTTTTTCTTC-TTCTTTAACCTCTTCTTTTTCTTC-TTCTTTAACCTCTTCTTTTTCTTC-TTCTTTAACCTCTTCTTTTTCTTCDesign primers
421120TATCACACCACTTCTG-TATCACACCACTTCTG-TATCACACCACTTCTG-TATCACACCACTTCTGDesign primers
469975TTTTATCACA-TTTTATCACA-TTTTATCACADesign primers
541759CACAGAATTAAA-CACAGAATTAAA-CACAGAATTAAADesign primers
579052TTTAAGATAAT-TTTAAGATAAT-TTTAAGATAAT-TTTAAGATAAT-TTTAAGATAATDesign primers
618059CTAAAAAAGAAATTC-CTAAAAAAGAAATTC-CTAAAAAAGAAATTC-CTAAAAAAGAAATTC-CTAAAAAAGAAATTC-CTAAAAAAGAAATTC-CTAAAAAAGAAATTC-CTAAAAAAGAAATTCDesign primers
710807AAATATCTCAATAAT-AAATATCTCAATAAT-AAATATCTCAATAAT-AAATATCTCAATAAT-AAATATCTCAATAAT-AAATATCTCAATAAT-AAATATCTCAATAAT-AAATATCTCAATAAT-AAATATCTCAATAAT-AAATATCTCAATAATDesign primers
772445CCCCAATGAACC-CCCCAATGAACC-CCCCAATGAACCDesign primers
775916TCGTATTTTCTTGTGAGATCA-TCGTATTTTCTTGTGAGATCA-TCGTATTTTCTTGTGAGATCA-TCGTATTTTCTTGTGAGATCA-TCGTATTTTCTTGTGAGATCA-TCGTATTTTCTTGTGAGATCADesign primers
795020TCATTTTAAATCCTT-TCATTTTAAATCCTT-TCATTTTAAATCCTT-TCATTTTAAATCCTT-TCATTTTAAATCCTTDesign primers
937750AAAAAAAAGAGTTTTAAAAAAAAGAGTTTTAAAAAAAAGAGTTTTDesign primers
937796AAAAGAAAGAGTTTTAAAAAGAAAGAGTTTTAAAAAGAAAGAGTTTTADesign primers
1039236CAATCATTCAATCATC-CAATCATTCAATCATC-CAATCATTCAATCATCDesign primers
1039291TCAAGTAA-TCAAGTAA-TCAAGTAA-TCAAGTAA-TCAAGTAA-TCAAGTAA-TCAAGTAA-TCAAGTAA-TCAAGTAA-TCAAGTAA-TCAAGTAA-TCAAGTAA-TCAAGTAA-TCAAGTAA-TCAAGTAA-TCAAGTAA-TCAAGTAADesign primers
1091729ATCATAATTAACCCTCAAATC-ATCATAATTAACCCTCAAATC-ATCATAATTAACCCTCAAATC-ATCATAATTAACCCTCAAATCDesign primers
1211485AAATCTTTCTGTTCTTTAACC-AAATCTTTCTGTTCTTTAACC-AAATCTTTCTGTTCTTTAACCDesign primers
1211627TTTGTTTTTCTTGTTCTGTCT-TTTGTTTTTCTTGTTCTGTCT-TTTGTTTTTCTTGTTCTGTCTDesign primers
1239257CATTTATTTGG-CATTTATTTGG-CATTTATTTGGDesign primers
1274031AAGATTAAAT-AAGATTAAAT-AAGATTAAAT-AAGATTAAAT-AAGATTAAAT-AAGATTAAAT-AAGATTAAAT-AAGATTAAAT-AAGATTAAAT-AAGATTAAAT-AAGATTAAATDesign primers
1285133AAAGAGAAT-AAAGAGAAT-AAAGAGAAT-AAAGAGAAT-AAAGAGAAT-AAAGAGAATDesign primers
1353583AAACCC-AAACCC-AAACCC-AAACCCDesign primers
1379764AAGAATAA-AAGAATAA-AAGAATAA-AAGAATAA-AAGAATAA-AAGAATAA-AAGAATAA-AAGAATAA-AAGAATAA-AAGAATAA-AAGAATAA-AAGAATAA-AAGAATAA-AAGAATAA-AAGAATAA-AAGAATAADesign primers
1383897CAATCATTCAATCATC-CAATCATTCAATCATC-CAATCATTCAATCATCDesign primers
1383952TCAAGTAA-TCAAGTAA-TCAAGTAA-TCAAGTAA-TCAAGTAA-TCAAGTAA-TCAAGTAA-TCAAGTAA-TCAAGTAA-TCAAGTAA-TCAAGTAA-TCAAGTAA-TCAAGTAA-TCAAGTAA-TCAAGTAA-TCAAGTAA-TCAAGTAADesign primers
1406794TGTTTTCAT-TGTTTTCAT-TGTTTTCAT-TGTTTTCATDesign primers

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